Genome Property Definition Page

AccessionGenProp0174
Nameribosome, bacterial, large subunit
TypeSYSTEM
DescriptionRibosome, bacterial, large subunit. This genome property now follows a revised nomenclature from February 2014.
JCVI RoleRibosomal proteins: synthesis and modification
Parent PropertyGenProp0197: protein biosynthesis
GenProp0197: protein biosynthesis
Literature References
[ 1 ]Ban N, Beckmann R, Cate JH, Dinman JD, Dragon F, Ellis SR, Lafontaine DL, Lindahl L, Liljas A, Lipton JM, McAlear MA, Moore PB, Noller HF, Ortega J, Panse VG, Ramakrishnan V, Spahn CM, Steitz TA, Tchorzewski M, Tollervey D, Warren AJ, Williamson JR, Wilso  A new system for naming ribosomal proteins.  Curr Opin Struct Biol. 2014 Feb;24:165-9. doi: 10.1016/j.sbi.2014.01.002.  PMID 24524803
[ 1 ]Ban N, Beckmann R, Cate JH, Dinman JD, Dragon F, Ellis SR, Lafontaine DL, Lindahl L, Liljas A, Lipton JM, McAlear MA, Moore PB, Noller HF, Ortega J, Panse VG, Ramakrishnan V, Spahn CM, Steitz TA, Tchorzewski M, Tollervey D, Warren AJ, Williamson JR, Wilso  A new system for naming ribosomal proteins.  Curr Opin Struct Biol. 2014 Feb;24:165-9. doi: 10.1016/j.sbi.2014.01.002.  PMID 24524803

Components
Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
L7/12bL12YESTIGR00855 (HMM): ribosomal protein bL12
L7/12bL12YESTIGR00855 (HMM): ribosomal protein bL12
L17bL17YESTIGR00059 (HMM): ribosomal protein bL17
L17bL17YESTIGR00059 (HMM): ribosomal protein bL17
L19bL19YESTIGR01024 (HMM): ribosomal protein bL19
L19bL19YESTIGR01024 (HMM): ribosomal protein bL19
L20bL20YESTIGR01032 (HMM): ribosomal protein bL20
L20bL20YESTIGR01032 (HMM): ribosomal protein bL20
L21bL21YESTIGR00061 (HMM): ribosomal protein bL21
L21bL21YESTIGR00061 (HMM): ribosomal protein bL21
L25bL25NOPF01386 (HMM): ribosomal protein bL25
L25bL25NOPF01386 (HMM): ribosomal protein bL25
L27bL27YESTIGR00062 (HMM): ribosomal protein bL27
L27bL27YESTIGR00062 (HMM): ribosomal protein bL27
L28bL28YESTIGR00009 (HMM): ribosomal protein bL28
L28bL28YESTIGR00009 (HMM): ribosomal protein bL28
L31bL31YESTIGR00105 (HMM): ribosomal protein bL31
L31bL31YESTIGR00105 (HMM): ribosomal protein bL31
L32bL32YESTIGR01031 (HMM): ribosomal protein bL32
L32bL32YESTIGR01031 (HMM): ribosomal protein bL32
L33bL33YESTIGR01023 (HMM): ribosomal protein bL33
L33bL33YESTIGR01023 (HMM): ribosomal protein bL33
L34bL34YESTIGR01030 (HMM): ribosomal protein bL34
L34bL34YESTIGR01030 (HMM): ribosomal protein bL34
L35bL35YESTIGR00001 (HMM): ribosomal protein bL35
L35bL35YESTIGR00001 (HMM): ribosomal protein bL35
L36bL36YESTIGR01022 (HMM): ribosomal protein bL36
L36bL36YESTIGR01022 (HMM): ribosomal protein bL36
L9bL9YESTIGR00158 (HMM): ribosomal protein bL9
L9bL9YESTIGR00158 (HMM): ribosomal protein bL9
L1uL1YESTIGR01169 (HMM): ribosomal protein uL1
L1uL1YESTIGR01169 (HMM): ribosomal protein uL1
L10uL10YESPF00466 (HMM): ribosomal protein uL10
L10uL10YESPF00466 (HMM): ribosomal protein uL10
L11uL11YESTIGR01632 (HMM): ribosomal protein uL11
L11uL11YESTIGR01632 (HMM): ribosomal protein uL11
L13uL13YESTIGR01066 (HMM): ribosomal protein uL13
L13uL13YESTIGR01066 (HMM): ribosomal protein uL13
L14uL14YESTIGR01067 (HMM): ribosomal protein uL14
L14uL14YESTIGR01067 (HMM): ribosomal protein uL14
L15uL15YESTIGR01071 (HMM): ribosomal protein uL15
L15uL15YESTIGR01071 (HMM): ribosomal protein uL15
L16uL16YESTIGR01164 (HMM): ribosomal protein uL16
L16uL16YESTIGR01164 (HMM): ribosomal protein uL16
L18uL18YESTIGR00060 (HMM): ribosomal protein uL18
L18uL18YESTIGR00060 (HMM): ribosomal protein uL18
L2uL2YESTIGR01171 (HMM): ribosomal protein uL2
L2uL2YESTIGR01171 (HMM): ribosomal protein uL2
L22uL22YESTIGR01044 (HMM): ribosomal protein uL22
L22uL22YESTIGR01044 (HMM): ribosomal protein uL22
L23uL23YESPF00276 (HMM): ribosomal protein uL23
L23uL23YESPF00276 (HMM): ribosomal protein uL23
L24uL24YESTIGR01079 (HMM): ribosomal protein uL24
L24uL24YESTIGR01079 (HMM): ribosomal protein uL24
L29uL29YESTIGR00012 (HMM): ribosomal protein uL29
L29uL29YESTIGR00012 (HMM): ribosomal protein uL29
L3uL3YESPF00297 (HMM): ribosomal protein uL3
L3uL3YESPF00297 (HMM): ribosomal protein uL3
L30uL30NOTIGR01308 (HMM): ribosomal protein uL30
L30uL30NOTIGR01308 (HMM): ribosomal protein uL30
L4uL4YESPF00573 (HMM): ribosomal protein uL4
L4uL4YESPF00573 (HMM): ribosomal protein uL4
L5uL5YESPF00281 (HMM): ribosomal protein uL5
L5uL5YESPF00281 (HMM): ribosomal protein uL5
L6uL6YESPF00347 (HMM): ribosomal protein uL6
L6uL6YESPF00347 (HMM): ribosomal protein uL6

Parent Properties
AccessionName
GenProp0197protein biosynthesis
GenProp0197protein biosynthesis


Sibling Properties
AccessionName
GenProp0016selenocysteine system
GenProp0312pyrrolysine
GenProp0132transcription termination - antitermination Nus factors
GenProp0148release factor 2 programmed frameshift
GenProp0175ribosome, bacterial, small subunit
GenProp0188GatABC aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase complex
GenProp0189tRNA-Gln direct aminoacylation
GenProp0211tmRNA trans-translation system
GenProp0258tRNA aminoacylation
GenProp0259tRNA-Asn direct aminoacylation
GenProp0304cysteine biosynthesis, tRNA-dependent
GenProp0634Sigma-54 (RpoN) systems
GenProp0692selenouridine-containing tRNA
GenProp0704tRNA U34 carboxymethylaminomethyl modification
GenProp0740translation initiation, bacterial
GenProp0741translation elongation, bacterial
GenProp0746translation termination, bacterial
GenProp0812rho-dependent termination