Genome Property Definition Page

AccessionGenProp0174
Nameribosome, bacterial, large subunit
TypeSYSTEM
DescriptionRibosome, bacterial, large subunit. This property allows HMMs specific for ribosomal proteins to be tested in phylogenetic profiles
JCVI RoleRibosomal proteins: synthesis and modification
Parent PropertyGenProp0197: protein biosynthesis

Components
Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
L1L1YESTIGR01169 (HMM): ribosomal protein L1
L10L10YESPF00466 (HMM): ribosomal protein L10
L11L11YESTIGR01632 (HMM): ribosomal protein L11
L13L13YESTIGR01066 (HMM): ribosomal protein L13
L14L14YESTIGR01067 (HMM): ribosomal protein L14
L15L15YESTIGR01071 (HMM): ribosomal protein L15
L16L16YESTIGR01164 (HMM): ribosomal protein L16
L17L17YESTIGR00059 (HMM): ribosomal protein L17
L18L18YESTIGR00060 (HMM): ribosomal protein L18
L19L19YESTIGR01024 (HMM): ribosomal protein L19
L2L2YESTIGR01171 (HMM): ribosomal protein L2
L20L20YESTIGR01032 (HMM): ribosomal protein L20
L21L21YESTIGR00061 (HMM): ribosomal protein L21
L22L22YESTIGR01044 (HMM): ribosomal protein L22
L23L23YESPF00276 (HMM): ribosomal protein L23
L24L24YESTIGR01079 (HMM): ribosomal protein L24
L25L25NOPF01386 (HMM): ribosomal L25p family
L27L27YESTIGR00062 (HMM): ribosomal protein L27
L28L28YESTIGR00009 (HMM): ribosomal protein L28
L29L29YESTIGR00012 (HMM): ribosomal protein L29
L3L3YESPF00297 (HMM): ribosomal protein L3
L30L30NOTIGR01308 (HMM): ribosomal protein L30
L31L31YESTIGR00105 (HMM): ribosomal protein L31
L32L32YESTIGR01031 (HMM): ribosomal protein L32
L33L33YESTIGR01023 (HMM): ribosomal protein L33
L34L34YESTIGR01030 (HMM): ribosomal protein L34
L35L35YESTIGR00001 (HMM): ribosomal protein L35
L36L36YESTIGR01022 (HMM): ribosomal protein L36
L4L4YESPF00573 (HMM): ribosomal protein L4/L1 family
L5L5YESPF00281 (HMM): ribosomal protein L5
L6L6YESPF00347 (HMM): ribosomal protein L6
L7/12L7YESTIGR00855 (HMM): ribosomal protein L7/L12
L9L9YESTIGR00158 (HMM): ribosomal protein L9

Parent Properties
AccessionName
GenProp0197protein biosynthesis


Sibling Properties
AccessionName
GenProp0016selenocysteine system
GenProp0312pyrrolysine
GenProp0132transcription termination - antitermination Nus factors
GenProp0148release factor 2 programmed frameshift
GenProp0175ribosome, bacterial, small subunit
GenProp0188GatABC aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase complex
GenProp0189tRNA-Gln direct aminoacylation
GenProp0211tmRNA trans-translation system
GenProp0258tRNA aminoacylation
GenProp0259tRNA-Asn direct aminoacylation
GenProp0304cysteine biosynthesis, tRNA-dependent
GenProp0634Sigma-54 (RpoN) systems
GenProp0692selenouridine-containing tRNA
GenProp0704tRNA U34 carboxymethylaminomethyl modification
GenProp0740translation initiation, bacterial
GenProp0741translation elongation, bacterial
GenProp0746translation termination, bacterial
GenProp0812rho-dependent termination