Genome Property Definition Page
Accession | GenProp0177 |
Name | nickel-dependent hydrogenase |
Type | SYSTEM |
Description | rough-in, NOT PUBLIC |
JCVI Role | Electron transport |
Parent Property | GenProp0131: electron transport |
Components
Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
---|---|---|---|---|
Ni/Fe-hydrogenase, b-type cytochrome subunit | CybH | NO | TIGR02125 (HMM): Ni/Fe-hydrogenase, b-type cytochrome subunit | |
high-affinity nickel-transport protein | Ni_trans | NO | TIGR00802 (HMM): transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family | |
HypA hydrogenase nickel insertion protein | hypA | YES | PF01155 (HMM): hydrogenase expression/synthesis HypA family | |
HypB hydrogenase accessory protein | hypB | YES | TIGR00073 (HMM): hydrogenase accessory protein HypB | |
HypC hydrogenase assembly chaperone | hypC | YES | TIGR00074 (HMM): hydrogenase assembly chaperone HypC/HupF | |
HypD hydrogenase formation protein | hypD | YES | PF01924 (HMM): hydrogenase formation HypA family TIGR00075 (HMM): hydrogenase expression/formation protein HypD | |
HypE protein | hypE | YES | TIGR02124 (HMM): hydrogenase expression/formation protein HypE | |
HypF hydrogenase maturation protein | hypF | YES | TIGR00143 (HMM): carbamoyltransferase HypF | |
large subunit, [Ni/Fe] hydrogenase | lg_sub | YES | PF00374 (HMM): nickel-dependent hydrogenase | |
maturation protease, [Ni/Fe] hydrogenase | prtase | YES | TIGR00072 (HMM): hydrogenase maturation protease | |
small subunit, [Ni/Fe] hydrogenase | sm_sub | YES | TIGR00391 (HMM): hydrogenase (NiFe) small subunit (hydA) |
Parent Properties
Accession | Name |
---|---|
GenProp0131 | electron transport |
Sibling Properties
Accession | Name |
---|---|
GenProp0130 | Rnf-type electron transport complex |
GenProp0135 | NADH dehydrogenase I |