Genome Property Definition Page

AccessionGenProp0183
NamedTDP-L-rhamnose biosynthesis from dTDP-4-dehydro-L-rhamnose
TypeMETAPATH
JCVI RoleBiosynthesis and degradation of surface polysaccharides and lipopolysaccharides
Parent PropertyGenProp0186: storage and structural polymer biosynthesis
GenProp0795: carbohydrate biosynthesis
GenProp0950: 4,6-dideoxy-4-oxo-dTDP-D-glucose biosynthesis from glucose-1-phosphate
GenProp0186: storage and structural polymer biosynthesis
GenProp0795: carbohydrate biosynthesis
GenProp0950: 4,6-dideoxy-4-oxo-dTDP-D-glucose biosynthesis from glucose-1-phosphate
GenProp0186: storage and structural polymer biosynthesis
GenProp0795: carbohydrate biosynthesis
GenProp0950: 4,6-dideoxy-4-oxo-dTDP-D-glucose biosynthesis from glucose-1-phosphate
Literature References
[ 1 ]Giraud MF, Leonard GA, Field RA, Berlind C, Naismith JH.  RmlC, the third enzyme of dTDP-L-rhamnose pathway, is a new class of epimerase.  Nat Struct Biol. 2000 May;7(5):398-402.  PMID 10802738
[ 1 ]Giraud MF, Leonard GA, Field RA, Berlind C, Naismith JH.  RmlC, the third enzyme of dTDP-L-rhamnose pathway, is a new class of epimerase.  Nat Struct Biol. 2000 May;7(5):398-402.  PMID 10802738
[ 1 ]Giraud MF, Leonard GA, Field RA, Berlind C, Naismith JH.  RmlC, the third enzyme of dTDP-L-rhamnose pathway, is a new class of epimerase.  Nat Struct Biol. 2000 May;7(5):398-402.  PMID 10802738
Web ReferencesKEGG: Streptomycin biosynthesis
METACYC: dTDP-L-rhamnose biosynthesis I
KEGG: Streptomycin biosynthesis
METACYC: dTDP-L-rhamnose biosynthesis I
KEGG: Streptomycin biosynthesis
METACYC: dTDP-L-rhamnose biosynthesis I

Components
Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
source of dTDP-4-dehydro-L-rhamnose4dhLRhaYESGenProp1032 (GENPROP): dTDP-4-dehydro-L-rhamnose biosynthesis from 4,6-dideoxy-4-oxo-dTDP-D-glucose
GenProp1032 (GENPROP): dTDP-4-dehydro-L-rhamnose biosynthesis from 4,6-dideoxy-4-oxo-dTDP-D-glucose
GenProp1032 (GENPROP): dTDP-4-dehydro-L-rhamnose biosynthesis from 4,6-dideoxy-4-oxo-dTDP-D-glucose
source of dTDP-4-dehydro-L-rhamnose4dhLRhaYESGenProp1032 (GENPROP): dTDP-4-dehydro-L-rhamnose biosynthesis from 4,6-dideoxy-4-oxo-dTDP-D-glucose
GenProp1032 (GENPROP): dTDP-4-dehydro-L-rhamnose biosynthesis from 4,6-dideoxy-4-oxo-dTDP-D-glucose
GenProp1032 (GENPROP): dTDP-4-dehydro-L-rhamnose biosynthesis from 4,6-dideoxy-4-oxo-dTDP-D-glucose
source of dTDP-4-dehydro-L-rhamnose4dhLRhaYESGenProp1032 (GENPROP): dTDP-4-dehydro-L-rhamnose biosynthesis from 4,6-dideoxy-4-oxo-dTDP-D-glucose
GenProp1032 (GENPROP): dTDP-4-dehydro-L-rhamnose biosynthesis from 4,6-dideoxy-4-oxo-dTDP-D-glucose
GenProp1032 (GENPROP): dTDP-4-dehydro-L-rhamnose biosynthesis from 4,6-dideoxy-4-oxo-dTDP-D-glucose
dTDP-4-dehydrorhamnose reductaserfbDYESTIGR01214 (HMM): dTDP-4-dehydrorhamnose reductase
TIGR01214 (HMM): dTDP-4-dehydrorhamnose reductase
TIGR01214 (HMM): dTDP-4-dehydrorhamnose reductase
dTDP-4-dehydrorhamnose reductaserfbDYESTIGR01214 (HMM): dTDP-4-dehydrorhamnose reductase
TIGR01214 (HMM): dTDP-4-dehydrorhamnose reductase
TIGR01214 (HMM): dTDP-4-dehydrorhamnose reductase
dTDP-4-dehydrorhamnose reductaserfbDYESTIGR01214 (HMM): dTDP-4-dehydrorhamnose reductase
TIGR01214 (HMM): dTDP-4-dehydrorhamnose reductase
TIGR01214 (HMM): dTDP-4-dehydrorhamnose reductase

Parent Properties
AccessionName
GenProp0186storage and structural polymer biosynthesis
GenProp0795carbohydrate biosynthesis
GenProp09504,6-dideoxy-4-oxo-dTDP-D-glucose biosynthesis from glucose-1-phosphate
GenProp0186storage and structural polymer biosynthesis
GenProp0795carbohydrate biosynthesis
GenProp09504,6-dideoxy-4-oxo-dTDP-D-glucose biosynthesis from glucose-1-phosphate
GenProp0186storage and structural polymer biosynthesis
GenProp0795carbohydrate biosynthesis
GenProp09504,6-dideoxy-4-oxo-dTDP-D-glucose biosynthesis from glucose-1-phosphate


Sibling Properties
AccessionName
GenProp0055polyhydroxyalkanoic acids
GenProp0156cyanophycin-like storage polymers
GenProp0158peptidoglycan(murein) biosynthesis
GenProp0168glycogen system
GenProp0297lipopolysaccharide biosynthesis
GenProp0652exopolysaccharide biosynthesis, exosortase A-associated
GenProp0655exopolysaccharide biosynthesis, exosortase B-associated
GenProp0658cellulose biosynthesis
GenProp0793CMP-N-acetylneuraminate biosynthesis from UDP-N-acetylglucosamine
GenProp0822poly(gamma-glutamic acid) biosynthesis
GenProp0906poly-beta-1,6 N-acetyl-D-glucosamine system, IcaADBC type
GenProp0907poly-beta-1,6 N-acetyl-D-glucosamine system, PgaABCD type
GenProp0264glucosylglycerol biosynthesis
GenProp0750UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate
GenProp0766anhydro-N-acetylmuramic acid to N-acetylglucosamine-phosphate
GenProp0794proposed N-acetyl sugar amidation module WbuXYZ
GenProp0796CMP-pseudaminic acid biosynthesis from UDP-N-acetylglucosamine
GenProp0811S-layer homology domain-mediated cell wall binding
GenProp0951dTDP-3-aminofucose biosynthesis from 4,6-dideoxy-4-oxo-dTDP-D-glucose
GenProp0972dTDP-4-acetamido-4,6-dideoxy-D-galactose (dTDP-Fuc4NAc) biosynthesis
GenProp1015dTDP-3-amino-3,6-dideoxy-D-glucose (Qui3N) biosynthesis from 4,6-dideoxy-4-oxo-dTDP-D-glucose