Genome Property Definition Page
Accession | GenProp0241 | |
Name | phosphonate catabolism | |
Type | METAPATH | |
Description | The capability to degrade phosphonates is believed to consist minimally of a system for transporting phosphonate compounds (those with carbon-PO3 linkages) coupled with a pathway for the hydrolysis of such bonds. Two classes of system are known, those that handle broad classes of phosphonate compounds and those that handle specific molecules. Genomes with evidence for either system will be assigned the YES state for this property. | |
Parent Property | GenProp0142: catabolism GenProp0242: phosphorus metabolism | |
Literature References |
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Gene Ontology Term | GO:0019700: organic phosphonate catabolic process (biological_process) |
Components
Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
---|---|---|---|---|
Phosphonate catabolism operons associated proteins | assoc | NO | TIGR03364 (HMM): FAD dependent oxidoreductase TIGR03364 TIGR03276 (HMM): phosphonate degradation operons associated HDIG domain protein | GO:0019700: organic phosphonate catabolic process GO:0019700: organic phosphonate catabolic process |
phosphonate utilization systems | phn_cat | YES | GenProp0232 (GENPROP): phosphonates C-P lyase system GenProp0720 (GENPROP): 2-aminoethylphosphonate utilization | GO:0019700: organic phosphonate catabolic process GO:0019700: organic phosphonate catabolic process |
Parent Properties
Accession | Name |
---|---|
GenProp0142 | catabolism |
GenProp0242 | phosphorus metabolism |
Child Properties
Accession | Name |
---|---|
GenProp0232 | phosphonates C-P lyase system |
GenProp0710 | generic phosphonates utilization |
GenProp0712 | 2-aminoethylphosphonate (AEP) ABC transporter, type I, PhnSTUV |
GenProp0720 | 2-aminoethylphosphonate utilization |
GenProp0736 | proposed phosphonate catabolism pathway HpnWXZ |
Sibling Properties
Accession | Name |
---|---|
GenProp0055 | polyhydroxyalkanoic acids |
GenProp0141 | galactose-6-phosphate degradation via tagatose-6-phosphate |
GenProp0156 | cyanophycin-like storage polymers |
GenProp0168 | glycogen system |
GenProp0210 | phenylacetic acid catabolism |
GenProp0231 | 4-hydroxyphenylacetate degradation |
GenProp0233 | GABA utilization |
GenProp0238 | 2-aminoethylphosphonate catabolism to acetaldehyde |
GenProp0239 | propionyl-CoA catabolism |
GenProp0271 | trehalose utilization |
GenProp0272 | pyruvate fermentation to acetoin |
GenProp0273 | protocatechuate degradation to beta-ketoadipate |
GenProp0283 | beta-ketoadipate degradation to succinyl-CoA and acetyl-CoA |
GenProp0294 | ethanolamine degradation proteinaceous organelle |
GenProp0457 | rhamnose catabolism |
GenProp0458 | fucose catabolism |
GenProp0461 | utilization of deoxynucleosides |
GenProp0653 | ectoine catabolism |
GenProp0674 | malonate decarboxylase |
GenProp0686 | allantoin catabolism to glyoxalate and urea |
GenProp0687 | allantoin catabolism to oxamate and carbamoyl-phosphate |
GenProp0688 | urate catabolism to allantoin |
GenProp0691 | glycolysis |
GenProp0693 | fructose utilization as fructose-1,6-bisphosphate |
GenProp0694 | glucose utilization as fructose-1,6-bisphosphate |
GenProp0700 | purine catabolism via urate, xanthine and allantoin |
GenProp0702 | benzoyl-CoA reductase |
GenProp0703 | 4-hydroxybenzoyl-CoA reductase |
GenProp0706 | cyclohexa-1,5-diene-1-carbonyl-CoA to 3-hydroxypimelyl-CoA, dch/had/oah pathway |
GenProp0708 | catechol meta-cleavage pathway |
GenProp0709 | benzoate catabolism BoxABC pathway |
GenProp0711 | catechol ortho-cleavage upper pathway |
GenProp0714 | galactarate utilization via tartronate semi-aldehyde |
GenProp0715 | galactarate utilization via 2-oxoglutarate semialdehyde |
GenProp0716 | glucarate utilization via tartronate semi-aldehyde |
GenProp0717 | glucarate utilization via 2-oxoglutarate semialdehyde |
GenProp0718 | oxalate degradation |
GenProp0734 | amino acid catabolism |
GenProp0749 | choline sulfate utilization |
GenProp0760 | putrescine degradation to GABA via gamma-glutamylation |
GenProp0763 | nicotinate fermentation to pyruvate and propionate |
GenProp0810 | encapsulin proteinaceous organelle |
GenProp0813 | pyrimidine utilization operon, RutABCDEFGR |
GenProp0902 | quinohemoprotein amine dehydrogenase |
GenProp1071 | myo-inositol catabolism |
GenProp1072 | cyanase system |
GenProp1076 | choline TMA-lyase system |
GenProp0190 | phosphate ABC transporter (pstSCAB-phoU) |
GenProp0243 | ATP synthases |
GenProp0724 | phosphonoacetaldehyde biosynthesis from phosphoenolpyruvate |