Genome Property Definition Page

AccessionGenProp0258
NametRNA aminoacylation
TypeGUILD
DescriptionIn all species, it is presumed that tRNA molecules for all 20 common amino acids exist are become charged with the correct amino acid. Most are changed directly by a known ligase that is a single polypeptide chain, but not all.
JCVI RoletRNA aminoacylation
Parent PropertyGenProp0197: protein biosynthesis
GenProp0819: RNA metabolism

Components
Step NameStep NumRequiredEvidence (Method)Evidence Go TermsBranch
alanyl-tRNA synthetaseAlaYESTIGR00344 (HMM): alanine--tRNA ligase1
arginyl-tRNA synthetaseArgYESTIGR00456 (HMM): arginine--tRNA ligase
PF00750 (HMM): arginine--tRNA ligase
1
Asn direct aminoacylationAsn_dirYESTIGR00457 (HMM): asparagine--tRNA ligaseAsn_dir
aspartyl-tRNA synthetaseAspYESTIGR00458 (HMM): aspartate--tRNA(Asn) ligase
TIGR00459 (HMM): aspartate--tRNA ligase
1
cysteinyl-tRNA synthetaseCysYESTIGR00435 (HMM): cysteine--tRNA ligase1
Gln direct aminoacylationGln_dirYESTIGR00440 (HMM): glutamine--tRNA ligaseGln_dir
glutamyl-tRNA synthetaseGluYESTIGR00464 (HMM): glutamate--tRNA ligase
TIGR00463 (HMM): glutamate--tRNA ligase
1
glycyl-tRNA synthetase, alpha subunitGly_AYESTIGR00388 (HMM): glycine--tRNA ligase, alpha subunitGly_AB
glycyl-tRNA synthetase, beta subunitGly_BYESTIGR00211 (HMM): glycine--tRNA ligase, beta subunitGly_AB
glycyl-tRNA synthetaseGly_homYESTIGR00389 (HMM): glycine--tRNA ligaseGly_hom
histidyl-tRNA synthetaseHisYESTIGR00442 (HMM): histidine--tRNA ligase1
isoleucyl-tRNA synthetaseIleYESTIGR00392 (HMM): isoleucine--tRNA ligase1
leucyl-tRNA synthetaseLeuYESTIGR00395 (HMM): leucine--tRNA ligase
TIGR00396 (HMM): leucine--tRNA ligase
1
lysyl-tRNA synthetaseLysYESTIGR00467 (HMM): lysine--tRNA ligase
TIGR00499 (HMM): lysine--tRNA ligase
1
methionyl-tRNA synthetaseMetYESTIGR00398 (HMM): methionine--tRNA ligase1
methionyl-tRNA synthetase, beta subunitMet_BetNOTIGR00399 (HMM): methionine--tRNA ligase, beta subunit1
phenylalanyl-tRNA synthetase, alpha subunitPhe_AYESTIGR00468 (HMM): phenylalanine--tRNA ligase, alpha subunit1
phenylalanyl-tRNA synthetase, beta subunitPhe_BYESTIGR00471 (HMM): phenylalanine--tRNA ligase, beta subunit
TIGR00472 (HMM): phenylalanine--tRNA ligase, beta subunit
1
prolyl-tRNA synthetaseProYESTIGR00408 (HMM): proline--tRNA ligase
TIGR00409 (HMM): proline--tRNA ligase
1
seryl-tRNA synthetaseSerYESTIGR00414 (HMM): serine--tRNA ligase
TIGR00415 (HMM): serine--tRNA ligase
1
threonyl-tRNA synthetaseThrYESTIGR00418 (HMM): threonine--tRNA ligase1
tryptophanyl-tRNA synthetaseTrpYESTIGR00233 (HMM): tryptophan--tRNA ligase1
tyrosyl-tRNA synthetaseTyrYESTIGR00234 (HMM): tyrosine--tRNA ligase1
valyl-tRNA synthetaseValYESTIGR00422 (HMM): valine--tRNA ligase1
GatA subunit, glutamyl-tRNA(Gln) amidotransferasegatAYESTIGR00132 (HMM): aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunitgln_ami
GatA as aspartyl-tRNA(Asn) complex candidategatA_NYESTIGR00132 (HMM): aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunitasp_ami
GatB subunit, glutamyl-tRNA(Gln) amidotransferasegatBYESTIGR00133 (HMM): aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunitgln_ami
GatB as aspartyl-tRNA(Asn) complex candidategatB_NYESTIGR00133 (HMM): aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunitasp_ami
GatC subunit, glutamyl-tRNA(Gln) amidotransferasegatCYESTIGR00135 (HMM): aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunitgln_ami
GatC as aspartyl-tRNA(Asn) complex candidategatC_NYESTIGR00135 (HMM): aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunitasp_ami
gatD subunit, archaeal glutamyl-tRNA(Gln) amidotransferasegatDYESTIGR02153 (HMM): glutamyl-tRNA(Gln) amidotransferase, subunit Dgln_arc
gatE subunit, archaeal glutamyl-tRNA(Gln) amidotransferasegatEYESTIGR00134 (HMM): glutamyl-tRNA(Gln) amidotransferase, subunit Egln_arc

Parent Properties
AccessionName
GenProp0197protein biosynthesis
GenProp0819RNA metabolism

Child Properties
AccessionName
GenProp0188GatABC aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase complex
GenProp0189tRNA-Gln direct aminoacylation
GenProp0259tRNA-Asn direct aminoacylation

Sibling Properties
AccessionName
GenProp0016selenocysteine system
GenProp0312pyrrolysine
GenProp0132transcription termination - antitermination Nus factors
GenProp0148release factor 2 programmed frameshift
GenProp0174ribosome, bacterial, large subunit
GenProp0175ribosome, bacterial, small subunit
GenProp0188GatABC aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase complex
GenProp0189tRNA-Gln direct aminoacylation
GenProp0211tmRNA trans-translation system
GenProp0259tRNA-Asn direct aminoacylation
GenProp0304cysteine biosynthesis, tRNA-dependent
GenProp0634Sigma-54 (RpoN) systems
GenProp0692selenouridine-containing tRNA
GenProp0704tRNA U34 carboxymethylaminomethyl modification
GenProp0740translation initiation, bacterial
GenProp0741translation elongation, bacterial
GenProp0746translation termination, bacterial
GenProp0812rho-dependent termination
GenProp0262RNA polymerase, bacterial
GenProp04826S RNA (eubacterial RNA polymerase regulator)
GenProp0677queuosine (Q-tRNA) biosynthesis from preQ0
GenProp0898RNA ligase/unknown protein pair
GenProp0948RNA repair, Hen1/Pnkp system
GenProp1060tRNA N6-threonylcarbamoyladenosine modification
GenProp1077tRNA(Pro) cmo5UGG modification
GenProp108216S rRNA C1402 m(4)Cm modification