Genome Property Definition Page

AccessionGenProp0485
NameF and P-type conjugation systems (type IV secretion), common components
TypeSYSTEM
DescriptionBoth the F-type (F factor like) and P-type (Ti plasmid like) conjucation systems use a core set of structures for the elaboration of a conjugative pilus. Components specific to these two systems are found in related Genome Properties.
JCVI RolePlasmid functions
Parent PropertyGenProp0489: F-type conjugation system
GenProp0489: F-type conjugation system
GenProp0489: F-type conjugation system
Gene Ontology TermGO:0009291: unidirectional conjugation (biological_process)
GO:0009291: unidirectional conjugation (biological_process)
GO:0009291: unidirectional conjugation (biological_process)
GO:0009291: unidirectional conjugation (biological_process)
GO:0009291: unidirectional conjugation (biological_process)
GO:0009291: unidirectional conjugation (biological_process)
GO:0009291: unidirectional conjugation (biological_process)
GO:0009291: unidirectional conjugation (biological_process)
GO:0009291: unidirectional conjugation (biological_process)

Components
Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
checked, decided not to includeIGNORENOnarrow species range (MANUAL)
checked, decided not to includeIGNORENOnarrow species range (MANUAL)
checked, decided not to includeIGNORENOnarrow species range (MANUAL)
pilin, TraA/TrbC/VirB2TraAYESPF05513 (HMM): TraA
TIGR02758 (HMM): type IV conjugative transfer system pilin TraA
PF04956 (HMM): conjugal transfer protein TrbC
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
pilin, TraA/TrbC/VirB2TraAYESPF05513 (HMM): TraA
TIGR02758 (HMM): type IV conjugative transfer system pilin TraA
PF04956 (HMM): conjugal transfer protein TrbC
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
pilin, TraA/TrbC/VirB2TraAYESPF05513 (HMM): TraA
TIGR02758 (HMM): type IV conjugative transfer system pilin TraA
PF04956 (HMM): conjugal transfer protein TrbC
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
T4SS protein TraB/TrbI/VirB10TraBYESPF06447 (HMM):
PF03743 (HMM): bacterial conjugation TrbI-like protein
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
T4SS protein TraB/TrbI/VirB10TraBYESPF06447 (HMM):
PF03743 (HMM): bacterial conjugation TrbI-like protein
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
T4SS protein TraB/TrbI/VirB10TraBYESPF06447 (HMM):
PF03743 (HMM): bacterial conjugation TrbI-like protein
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
ATPase, TraC/TrbE/VirB4TraCYESTIGR02746 (HMM): type-IV secretion system protein TraC
TIGR00929 (HMM): type IV secretion/conjugal transfer ATPase, VirB4 family
PF03135 (HMM): CagE, TrbE, VirB family, component of type IV transporter system
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
ATPase, TraC/TrbE/VirB4TraCYESTIGR02746 (HMM): type-IV secretion system protein TraC
TIGR00929 (HMM): type IV secretion/conjugal transfer ATPase, VirB4 family
PF03135 (HMM): CagE, TrbE, VirB family, component of type IV transporter system
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
ATPase, TraC/TrbE/VirB4TraCYESTIGR02746 (HMM): type-IV secretion system protein TraC
TIGR00929 (HMM): type IV secretion/conjugal transfer ATPase, VirB4 family
PF03135 (HMM): CagE, TrbE, VirB family, component of type IV transporter system
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
coupling factor, DNA-pumping ATPase TraDTraDYESTIGR02759 (HMM): type IV conjugative transfer system coupling protein TraDGO:0009291: unidirectional conjugation
coupling factor, DNA-pumping ATPase TraDTraDYESTIGR02759 (HMM): type IV conjugative transfer system coupling protein TraDGO:0009291: unidirectional conjugation
coupling factor, DNA-pumping ATPase TraDTraDYESTIGR02759 (HMM): type IV conjugative transfer system coupling protein TraDGO:0009291: unidirectional conjugation
T4SS protein TraE/TrbJ/VirB5TraEYESPF05309 (HMM): TraE protein
TIGR02761 (HMM): type IV conjugative transfer system protein TraE
TIGR02780 (HMM): P-type conjugative transfer protein TrbJ
TIGR02791 (HMM): P-type DNA transfer protein VirB5
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
T4SS protein TraE/TrbJ/VirB5TraEYESPF05309 (HMM): TraE protein
TIGR02761 (HMM): type IV conjugative transfer system protein TraE
TIGR02780 (HMM): P-type conjugative transfer protein TrbJ
TIGR02791 (HMM): P-type DNA transfer protein VirB5
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
T4SS protein TraE/TrbJ/VirB5TraEYESPF05309 (HMM): TraE protein
TIGR02761 (HMM): type IV conjugative transfer system protein TraE
TIGR02780 (HMM): P-type conjugative transfer protein TrbJ
TIGR02791 (HMM): P-type DNA transfer protein VirB5
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
mate-pair stab. TraG/TrbL/VirB6TraGYESPF07916 (HMM): TraG-like protein, N-terminal domain
PF04610 (HMM): TrbL/VirB6 plasmid conjugal transfer protein
TIGR02783 (HMM): P-type conjugative transfer protein TrbL
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
mate-pair stab. TraG/TrbL/VirB6TraGYESPF07916 (HMM): TraG-like protein, N-terminal domain
PF04610 (HMM): TrbL/VirB6 plasmid conjugal transfer protein
TIGR02783 (HMM): P-type conjugative transfer protein TrbL
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
mate-pair stab. TraG/TrbL/VirB6TraGYESPF07916 (HMM): TraG-like protein, N-terminal domain
PF04610 (HMM): TrbL/VirB6 plasmid conjugal transfer protein
TIGR02783 (HMM): P-type conjugative transfer protein TrbL
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
T4SS protein TraK/TrbG/VirB9TraKYESPF06586 (HMM): TraK protein
TIGR02756 (HMM): type-F conjugative transfer system secretin TraK
TIGR02775 (HMM): P-type conjugative transfer protein TrbG
TIGR02781 (HMM): P-type conjugative transfer protein VirB9
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
T4SS protein TraK/TrbG/VirB9TraKYESPF06586 (HMM): TraK protein
TIGR02756 (HMM): type-F conjugative transfer system secretin TraK
TIGR02775 (HMM): P-type conjugative transfer protein TrbG
TIGR02781 (HMM): P-type conjugative transfer protein VirB9
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
T4SS protein TraK/TrbG/VirB9TraKYESPF06586 (HMM): TraK protein
TIGR02756 (HMM): type-F conjugative transfer system secretin TraK
TIGR02775 (HMM): P-type conjugative transfer protein TrbG
TIGR02781 (HMM): P-type conjugative transfer protein VirB9
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
T4SS protein TraL/TrbD/VirB3TraLYESPF07178 (HMM): TraL protein
TIGR02762 (HMM): type IV conjugative transfer system protein TraL
PF05245 (HMM):
PF05101 (HMM): type IV secretory pathway, VirB3-like protein
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
T4SS protein TraL/TrbD/VirB3TraLYESPF07178 (HMM): TraL protein
TIGR02762 (HMM): type IV conjugative transfer system protein TraL
PF05245 (HMM):
PF05101 (HMM): type IV secretory pathway, VirB3-like protein
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
T4SS protein TraL/TrbD/VirB3TraLYESPF07178 (HMM): TraL protein
TIGR02762 (HMM): type IV conjugative transfer system protein TraL
PF05245 (HMM):
PF05101 (HMM): type IV secretory pathway, VirB3-like protein
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
GO:0009291: unidirectional conjugation
T4SS protein TraV/TrbH/VirB7TraVYESTIGR02747 (HMM): type IV conjugative transfer system protein TraVGO:0009291: unidirectional conjugation
T4SS protein TraV/TrbH/VirB7TraVYESTIGR02747 (HMM): type IV conjugative transfer system protein TraVGO:0009291: unidirectional conjugation
T4SS protein TraV/TrbH/VirB7TraVYESTIGR02747 (HMM): type IV conjugative transfer system protein TraVGO:0009291: unidirectional conjugation

Parent Properties
AccessionName
GenProp0489F-type conjugation system
GenProp0489F-type conjugation system
GenProp0489F-type conjugation system


Sibling Properties
AccessionName
GenProp0484F-type conjugation system (type IV secretion) specific components