Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
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stage 0 sporulation protein A | 0_A | YES | TIGR02875 (HMM): sporulation transcription factor Spo0A | |
dipicolinic acid synthetase, A subunit | Dipic_A | NO | TIGR02853 (HMM): dipicolinic acid synthetase, A subunit | |
dipicolinic acid synthetase, B subunit | Dipic_B | NO | TIGR02852 (HMM): dipicolinic acid synthetase, B subunit | |
germination protease | GPR | YES | TIGR01441 (HMM): GPR endopeptidase | |
stage III sporulation protein AA | III_AA | YES | TIGR02858 (HMM): stage III sporulation protein AA | |
stage III sporulation protein AB | III_AB | YES | TIGR02833 (HMM): stage III sporulation protein AB | |
stage III sporulation protein AC | III_AC | YES | TIGR02848 (HMM): stage III sporulation protein AC | |
stage III sporulation protein AD | III_AD | YES | TIGR02849 (HMM): stage III sporulation protein AD | |
stage III sporulation protein AE (TIGR02829) | III_AE | YES | TIGR02829 (HMM): stage III sporulation protein AE | |
stage III sporulation protein AF | III_AF | YES | TIGR02896 (HMM): stage III sporulation protein AF | |
stage III sporulation protein AG | III_AG | YES | TIGR02830 (HMM): stage III sporulation protein AG | |
transcriptional regulator SpoIIID | III_D | YES | TIGR02844 (HMM): sporulation transcriptional regulator SpoIIID | |
anti-anti-sigma-F | II_AA | YES | TIGR02886 (HMM): anti-sigma F factor antagonist | |
anti-sigma-F | II_AB | YES | TIGR01925 (HMM): anti-sigma F factor | |
sigma-F | II_AC | YES | TIGR02885 (HMM): RNA polymerase sigma-F factor | |
stage II sporulation protein D | II_D | YES | TIGR02870 (HMM): stage II sporulation protein D | |
stage II sporulation protein E | II_E | YES | TIGR02865 (HMM): stage II sporulation protein E | |
sigma-E protease SpoIIGA | II_GA | YES | TIGR02854 (HMM): sigma-E processing peptidase SpoIIGA | |
stage II sporulation protein M | II_M | YES | TIGR02831 (HMM): stage II sporulation protein M | |
stage II sporulation protein P | II_P | YES | TIGR02867 (HMM): stage II sporulation protein P | |
stage II sporulation protein R | II_R | YES | TIGR02837 (HMM): stage II sporulation protein R | |
stage IV sporulation protein A | IV_A | YES | TIGR02836 (HMM): stage IV sporulation protein A | |
stage IV sporulation protein B | IV_B | YES | TIGR02860 (HMM): stage IV sporulation protein B | |
SASP, alpha/beta type | SASP_AB | YES | PF00269 (HMM): small, acid-soluble spore proteins, alpha/beta type | |
SASP, gamma type | SASP_G | NO | TIGR01442 (HMM): small, acid-soluble spore protein, gamma-type | |
SASP, SspH-type | SASP_H | NO | TIGR02861 (HMM): small acid-soluble spore protein, H-type | |
stage VI sporulation protein D | VI_D | NO | TIGR02907 (HMM): stage VI sporulation protein D | |
stage V sporulation protein AC | V_AC | YES | TIGR02838 (HMM): stage V sporulation protein AC | |
stage V sporulation protein AD | V_AD | YES | TIGR02845 (HMM): stage V sporulation protein AD | |
stage V sporulation protein AE | V_AE | YES | TIGR02839 (HMM): stage V sporulation protein AE | |
stage V sporulation protein B | V_B | NO | TIGR02900 (HMM): stage V sporulation protein B | |
stage V sporulation protein K | V_K | NO | TIGR02881 (HMM): stage V sporulation protein K | |
stage V sporulation protein T | V_T | YES | TIGR02851 (HMM): stage V sporulation protein T | |
germination lipoprotein, YhcN/YlaJ family | YhcNfam | NO | TIGR02898 (HMM): sporulation lipoprotein, YhcN/YlaJ family | |
spore coat protein, CotS family | cotS | NO | TIGR02906 (HMM): spore coat protein, CotS family | |
GerKA-like paralogous family | ger(x)A | YES | PF03323 (HMM): Bacillus/Clostridium GerA spore germination protein | |
GerKB-like paralogous family | ger(x)B | YES | TIGR00912 (HMM): spore germination protein (amino acid permease) | |
GerKC-like paralogous family | ger(x)C | YES | TIGR02887 (HMM): germination protein, Ger(x)C family | |
ATP-dependent protease LonB | lonB | NO | TIGR02902 (HMM): ATP-dependent protease LonB | |
spore coat assembly protein SafA (yrbB) | safA | NO | TIGR02899 (HMM): spore coat assembly protein SafA | |
sigma-E | sigmaE | YES | TIGR02835 (HMM): RNA polymerase sigma-E factor | |
sigma-G | sigmaG | YES | TIGR02850 (HMM): RNA polymerase sigma-G factor | |
sigma-H | sigmaH | YES | TIGR02859 (HMM): RNA polymerase sigma-H factor | |
sigma-I (heat shock-induced) | sigmaI | NO | TIGR02895 (HMM): RNA polymerase sigma-I factor | |
sigma-K | sigmaK | YES | TIGR02846 (HMM): RNA polymerase sigma-K factor | |
spore coat assembly protease YabG | yabG | YES | TIGR02855 (HMM): sporulation peptidase YabG | |
sporulation protein YabP | yabP | YES | TIGR02892 (HMM): sporulation protein YabP | |
sporulation protein YabQ | yabQ | YES | TIGR02893 (HMM): spore cortex biosynthesis protein YabQ | |
sporulation protein YlbJ | ylbJ | YES | TIGR02871 (HMM): sporulation integral membrane protein YlbJ | |
sporulation protein, YlmC/YmxH family | ymxHfam | YES | TIGR02888 (HMM): sporulation protein, YlmC/YmxH family | |
germination protein YpeB | ypeB | YES | TIGR02889 (HMM): germination protein YpeB | |
sporulation protein YqfC | yqfC | YES | TIGR02856 (HMM): sporulation protein YqfC | |
sporulation protein YqfD | yqfD | YES | TIGR02876 (HMM): sporulation protein YqfD | |
spore coat protein YsxE | ysxE | NO | TIGR02904 (HMM): spore coat protein YsxE | |
sporulation protein YtaF | ytaF | YES | TIGR02840 (HMM): putative sporulation protein YtaF | |
sporulation protein YtfJ | ytfJ | YES | TIGR02874 (HMM): sporulation protein YtfJ | |
sporulation protein YtvI | ytvI | YES | TIGR02872 (HMM): sporulation integral membrane protein YtvI | |
sporulation protein YtxC | ytxC | YES | TIGR02834 (HMM): putative sporulation protein YtxC | |
sporulation protein YunB | yunB | YES | TIGR02832 (HMM): sporulation protein YunB | |
spore coat protein YutH | yutH | NO | TIGR02905 (HMM): spore coat protein YutH | |
putative sporulation protease YyaC | yyaC | YES | TIGR02841 (HMM): putative sporulation protein YyaC | |