Genome Property Definition Page

AccessionGenProp0639
Namearginine degradation via citrulline, ATP-generating
TypePATHWAY
DescriptionArginine may be degraded to generate ammonia, ATP and ornithine via citrulline and carbamoyl phosphate. The ornithine may be further processed via putrescine.
JCVI RoleAmino acids and amines
Parent PropertyGenProp0734: amino acid catabolism
GenProp0873: ion-motive antiporter cycles
GenProp0734: amino acid catabolism
GenProp0873: ion-motive antiporter cycles
GenProp0734: amino acid catabolism
GenProp0873: ion-motive antiporter cycles
Literature References
[ 1 ] Griswold A, Chen YY, Snyder JA, Burne RA   Characterization of the arginine deiminase operon of Streptococcus rattus FA-1.   Appl Environ Microbiol. 2004 Mar;70(3):1321-7.  PMID 15006749
[ 1 ] Griswold A, Chen YY, Snyder JA, Burne RA   Characterization of the arginine deiminase operon of Streptococcus rattus FA-1.   Appl Environ Microbiol. 2004 Mar;70(3):1321-7.  PMID 15006749
[ 1 ] Griswold A, Chen YY, Snyder JA, Burne RA   Characterization of the arginine deiminase operon of Streptococcus rattus FA-1.   Appl Environ Microbiol. 2004 Mar;70(3):1321-7.  PMID 15006749

Components
Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
arginine deiminaseArcAYESTIGR01078 (HMM): arginine deiminase
TIGR01078 (HMM): arginine deiminase
TIGR01078 (HMM): arginine deiminase
arginine deiminaseArcAYESTIGR01078 (HMM): arginine deiminase
TIGR01078 (HMM): arginine deiminase
TIGR01078 (HMM): arginine deiminase
arginine deiminaseArcAYESTIGR01078 (HMM): arginine deiminase
TIGR01078 (HMM): arginine deiminase
TIGR01078 (HMM): arginine deiminase
ornithine carbamoyltransferaseArcBYESTIGR00658 (HMM): ornithine carbamoyltransferase
TIGR00658 (HMM): ornithine carbamoyltransferase
TIGR00658 (HMM): ornithine carbamoyltransferase
ornithine carbamoyltransferaseArcBYESTIGR00658 (HMM): ornithine carbamoyltransferase
TIGR00658 (HMM): ornithine carbamoyltransferase
TIGR00658 (HMM): ornithine carbamoyltransferase
ornithine carbamoyltransferaseArcBYESTIGR00658 (HMM): ornithine carbamoyltransferase
TIGR00658 (HMM): ornithine carbamoyltransferase
TIGR00658 (HMM): ornithine carbamoyltransferase
carbamate kinaseArcCNOTIGR00746 (HMM): carbamate kinase
TIGR00746 (HMM): carbamate kinase
TIGR00746 (HMM): carbamate kinase
carbamate kinaseArcCNOTIGR00746 (HMM): carbamate kinase
TIGR00746 (HMM): carbamate kinase
TIGR00746 (HMM): carbamate kinase
carbamate kinaseArcCNOTIGR00746 (HMM): carbamate kinase
TIGR00746 (HMM): carbamate kinase
TIGR00746 (HMM): carbamate kinase
arginine-ornithine antiporterArcDNO2648 (RULE_BASE)

TIGR03810 (HMM): arginine-ornithine antiporter
2648 (RULE_BASE)

TIGR03810 (HMM): arginine-ornithine antiporter
2648 (RULE_BASE)

TIGR03810 (HMM): arginine-ornithine antiporter
arginine-ornithine antiporterArcDNO2648 (RULE_BASE)

TIGR03810 (HMM): arginine-ornithine antiporter
2648 (RULE_BASE)

TIGR03810 (HMM): arginine-ornithine antiporter
2648 (RULE_BASE)

TIGR03810 (HMM): arginine-ornithine antiporter
arginine-ornithine antiporterArcDNO2648 (RULE_BASE)

TIGR03810 (HMM): arginine-ornithine antiporter
2648 (RULE_BASE)

TIGR03810 (HMM): arginine-ornithine antiporter
2648 (RULE_BASE)

TIGR03810 (HMM): arginine-ornithine antiporter

Parent Properties
AccessionName
GenProp0734amino acid catabolism
GenProp0873ion-motive antiporter cycles
GenProp0734amino acid catabolism
GenProp0873ion-motive antiporter cycles
GenProp0734amino acid catabolism
GenProp0873ion-motive antiporter cycles


Sibling Properties
AccessionName
GenProp0139degradation of tyrosine via homogentisate
GenProp0145histidine degradation to glutamate
GenProp0309arginine catabolism to glutamate via arginine succinyltransferase (AST)
GenProp0456attenuation system: tryptophanase
GenProp0659tryptophan degradation to anthranilate
GenProp0867decarboxylation/antiport proton-motive cycle: aspartate-alanine
GenProp0869decarboxylation/antiport proton-motive cycle: arginine-agmatine
GenProp0870decarboxylation/antiport proton-motive cycle: lysine-cadaverine
GenProp0871decarboxylation/antiport proton-motive cycle: ornithine-putrescine
GenProp0872decarboxylation/antiport proton-motive cycle: histidine-histamine
GenProp0875decarboxylation/antiport proton-motive cycle: tyrosine-tyramine
GenProp0876decarboxylation/antiport proton-motive cycle: glutamate-GABA
GenProp1034decarboxylation/antiport proton-motive cycle: oxalate-formate