Genome Property Definition Page

AccessionGenProp0642
Nameputrescine biosynthesis from arginine utilizing agmatinase
TypePATHWAY
DescriptionL-arginine can be converted to the polyamine putrescine via this pathway for the purposes of arginine catabolism or for the biosynthesis of spermidine. This version of the pathway utilizes agmatinase while another does the same reaction in two steps via carbamoylputrescine.
JCVI RolePolyamine biosynthesis
Parent PropertyGenProp0063: biosynthesis
GenProp0063: biosynthesis
GenProp0063: biosynthesis

Components
Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
arginine decarboxylaseSpeAYESTIGR01273 (HMM): arginine decarboxylase
arginine decarboxylaseSpeAYESTIGR01273 (HMM): arginine decarboxylase
arginine decarboxylaseSpeAYESTIGR01273 (HMM): arginine decarboxylase
agmatinasespeBYESTIGR01230 (HMM): agmatinase
agmatinasespeBYESTIGR01230 (HMM): agmatinase
agmatinasespeBYESTIGR01230 (HMM): agmatinase

Parent Properties
AccessionName
GenProp0063biosynthesis
GenProp0063biosynthesis
GenProp0063biosynthesis


Sibling Properties
AccessionName
GenProp0077natural products biosynthesis
GenProp0126amino acid biosynthesis
GenProp0184cofactor biosynthesis
GenProp0185nucleotide biosynthesis
GenProp0186storage and structural polymer biosynthesis
GenProp0197protein biosynthesis
GenProp0219spermidine biosynthesis from arginine (via agmatine)
GenProp0267osmolyte biosynthesis
GenProp0641spermidine biosynthesis from putrescine and S-adenosylmethionine
GenProp0643putrescine biosynthesis from arginine via ornithine
GenProp0644putrescine biosynthesis from glutamate via ornithine
GenProp0645putrescine biosynthesis
GenProp0724phosphonoacetaldehyde biosynthesis from phosphoenolpyruvate
GenProp0738agmatine to putrescine via N-carbamoylputrescine
GenProp0795carbohydrate biosynthesis
GenProp0838lipid biosynthesis
GenProp0909capreomycidine biosynthesis
GenProp0942alkane biosynthesis, cyanobacterial
GenProp1053rSAM/selenodomain system
GenProp1056rhizo-twelve system
GenProp1057radical SAM/SPASM system GeoRSP