Genome Property Definition Page

AccessionGenProp0644
Nameputrescine biosynthesis from glutamate via ornithine
TypeMETAPATH
DescriptionPutrescine may be generated from ornithine by ornithine decarboxylase. Orninthine may in turn come from glutamate (GenProp0118) or arginine utilizing arginase or via citrulline (SpeAB, GenProp0639). This Property detects the potential for the biosynthesis of putrescine from glutamate via ornithine.
JCVI RolePolyamine biosynthesis
Parent PropertyGenProp0063: biosynthesis
GenProp0063: biosynthesis
GenProp0063: biosynthesis

Components
Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
ornithine decarboxylaseSpeC/FYES4.1.1.17 (ECNUM)

ornithine decarboxylase (com_name)

speC (gene_sym)

speF (gene_sym)

odc (gene_sym)
ornithine decarboxylaseSpeC/FYES4.1.1.17 (ECNUM)

ornithine decarboxylase (com_name)

speC (gene_sym)

speF (gene_sym)

odc (gene_sym)
ornithine decarboxylaseSpeC/FYES4.1.1.17 (ECNUM)

ornithine decarboxylase (com_name)

speC (gene_sym)

speF (gene_sym)

odc (gene_sym)
conversion of glutamate to ornithineglu-ornYESGenProp0118 (GENPROP): ornithine biosynthesis from glutamate, acetylated branch
conversion of glutamate to ornithineglu-ornYESGenProp0118 (GENPROP): ornithine biosynthesis from glutamate, acetylated branch
conversion of glutamate to ornithineglu-ornYESGenProp0118 (GENPROP): ornithine biosynthesis from glutamate, acetylated branch

Parent Properties
AccessionName
GenProp0063biosynthesis
GenProp0063biosynthesis
GenProp0063biosynthesis


Sibling Properties
AccessionName
GenProp0077natural products biosynthesis
GenProp0126amino acid biosynthesis
GenProp0184cofactor biosynthesis
GenProp0185nucleotide biosynthesis
GenProp0186storage and structural polymer biosynthesis
GenProp0197protein biosynthesis
GenProp0219spermidine biosynthesis from arginine (via agmatine)
GenProp0267osmolyte biosynthesis
GenProp0641spermidine biosynthesis from putrescine and S-adenosylmethionine
GenProp0642putrescine biosynthesis from arginine utilizing agmatinase
GenProp0643putrescine biosynthesis from arginine via ornithine
GenProp0645putrescine biosynthesis
GenProp0724phosphonoacetaldehyde biosynthesis from phosphoenolpyruvate
GenProp0738agmatine to putrescine via N-carbamoylputrescine
GenProp0795carbohydrate biosynthesis
GenProp0838lipid biosynthesis
GenProp0909capreomycidine biosynthesis
GenProp0942alkane biosynthesis, cyanobacterial
GenProp1053rSAM/selenodomain system
GenProp1056rhizo-twelve system
GenProp1057radical SAM/SPASM system GeoRSP