Genome Property Definition Page

AccessionGenProp0665
Namepeptide chain release operon, RctB-like/PrfH
TypeSYSTEM
DescriptionThis genome property describes a novel two-gene operon that consists of PrfH, which is a member of the bacterial class I peptide chain release factors, and a homolog of RctB, which is a protein of unknown function thought suggest to act in RNA processing.
JCVI RoleTranslation factors
Parent PropertyGenProp0475: Unknown biological process
GenProp0475: Unknown biological process
Literature References
[ 1 ]Baranov PV, Vestergaard B, Hamelryck T, Gesteland RF, Nyborg J, Atkins JF  Diverse bacterial genomes encode an operon of two genes, one of which is an unusual class-I release factor that potentially recognizes atypical mRNA signals other than normal stop codons.  Biol Direct. 2006 Sep 13;1(1):28.  PMID 16970810
[ 1 ]Baranov PV, Vestergaard B, Hamelryck T, Gesteland RF, Nyborg J, Atkins JF  Diverse bacterial genomes encode an operon of two genes, one of which is an unusual class-I release factor that potentially recognizes atypical mRNA signals other than normal stop codons.  Biol Direct. 2006 Sep 13;1(1):28.  PMID 16970810

Components
Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
peptide chain release factor HprfHYESTIGR03072 (HMM): putative peptide chain release factor H
peptide chain release factor HprfHYESTIGR03072 (HMM): putative peptide chain release factor H
translationally-coupled RctB family proteinrtcB_lkYESTIGR03073 (HMM): release factor H-coupled RctB family protein
translationally-coupled RctB family proteinrtcB_lkYESTIGR03073 (HMM): release factor H-coupled RctB family protein

Parent Properties
AccessionName
GenProp0475Unknown biological process
GenProp0475Unknown biological process


Sibling Properties
AccessionName
GenProp0470sporadically distributed four-gene operon
GenProp0471uncharacterized gene pair TIGR02683/TIGR02684
GenProp0472uncharacterized gene pair TIGR02687/TIGR02688
GenProp0627gene pair involved in iron and oxygen metabolism
GenProp0751Acidobacterial ADOP/PadR gene pairs
GenProp0790sporadic pair TIGR03545/TIGR03546
GenProp0798Enterococcus/Aeromonas extended locus
GenProp0830integral membrane mystery pair
GenProp0854ParB-rel/ThiF-rel cassette PRTRC
GenProp0868uncharacterized protein pair with twin-arg and repeat
GenProp0894Actinobacterial uncharacterized trio
GenProp0916radical SAM/uncharacterized protein TIGR03936 system
GenProp0940metallo-mystery pair
GenProp0959radical SAM/uncharacterized protein TIGR04002 system
GenProp0965YedE/YedF selenium handling system
GenProp1063Memo/AMMECR1/rSAM family trio system
GenProp1066uncharacterized cassette GAK (Grasp, Amphipathic, Kinase)
GenProp1086Firmicutes/Treponema mobile radical SAM system