Genome Property Definition Page
Accession | GenProp0685 |
Name | CRISPR system, I-D/Cyano subtype |
Type | SYSTEM |
Description | This property describes a set of CRISPR-Associated Sequence (Cas) proteins found in at least three Cyanobacteria, as well as in a diverse set of Archaea. Associated repeats are typically 35-37 nucleotides long. |
Parent Property | GenProp0021: CRISPR region |
Components
Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
---|---|---|---|---|
CRISPR-associated protein Cas1, Cyano-type | Cas1 | YES | TIGR00287 (HMM-CLUST): CRISPR-associated endonuclease Cas1 TIGR04093 (HMM): CRISPR-associated endonuclease Cas1, subtype CYANO | |
CRISPR-associated helicase, Cyano-type | Cy_cas3 | YES | TIGR03158 (HMM): CRISPR-associated helicase Cas3, subtype CYANO | |
CRISPR-associated protein Csc1 | Cyano1 | YES | TIGR03159 (HMM): CRISPR type I-D/CYANO-associated protein Csc1 | |
CRISPR-associated protein Csc2 | Cyano2 | YES | TIGR03157 (HMM): CRISPR type I-D/CYANO-associated protein Csc2 | |
CRISPR-associated protein Csc3 | Cyano3 | NO | TIGR03174 (HMM): CRISPR type I-D/CYANO-associated protein Csc3/Cas10d |
Parent Properties
Accession | Name |
---|---|
GenProp0021 | CRISPR region |
Sibling Properties
Accession | Name |
---|---|
GenProp0310 | CRISPR system, I-F/Ypest subtype |
GenProp0313 | CRISPR system, I-C/Dvulg subtype |
GenProp0314 | CRISPR system, II/Nmeni subtype |
GenProp0315 | CRISPR system, I-E/Ecoli subtype |
GenProp0316 | CRISPR system, III-B/RAMP module subtype |
GenProp0317 | CRISPR system, I-B subtype, Tneap branch |
GenProp0318 | CRISPR system, III-A/Mtube subtype |
GenProp0319 | CRISPR system, I-A/Apern subtype |
GenProp0320 | CRISPR system, I-B subtype, Hmari branch |
GenProp0469 | CRISPR system, Dpsyc subtype |
GenProp0670 | CRISPR system, Aferr subtype |
GenProp0768 | CRISPR system, Pging subtype |
GenProp0922 | CRISPR system, Myxan subtype |
GenProp1061 | CRISPR system, PreFran subtype |