Genome Property Definition Page

NameAcidobacterial ADOP/PadR gene pairs
DescriptionThis property represents the presence of a characteristic gene pair, found in large paralogous families in several species of Acidobacteria. One component is a putative transcriptional regulator related to PadR (TIGR03433). The other is ADOP, or Acidobacterial duplicated orphan permease (TIGR03434), an integral membrane protein related to ABC transporter permease components such as LolC, MacB, and FtsX but orphaned in the sense of not being found next to ATP-binding cassette (ABC) proteins. The function is unknown.
JCVI RoleUnknown substrate
Parent PropertyGenProp0475: Unknown biological process

Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
TIGR03434ADOPYESTIGR03434 (HMM): acidobacterial duplicated orphan permease
transcriptional regulator, Acidobacterial, PadR-familyPadRYESTIGR03433 (HMM): transcriptional regulator, Acidobacterial, PadR-family

Parent Properties
GenProp0475Unknown biological process

Sibling Properties
GenProp0470sporadically distributed four-gene operon
GenProp0471uncharacterized gene pair TIGR02683/TIGR02684
GenProp0472uncharacterized gene pair TIGR02687/TIGR02688
GenProp0627gene pair involved in iron and oxygen metabolism
GenProp0665peptide chain release operon, RctB-like/PrfH
GenProp0790sporadic pair TIGR03545/TIGR03546
GenProp0798Enterococcus/Aeromonas extended locus
GenProp0830integral membrane mystery pair
GenProp0854ParB-rel/ThiF-rel cassette PRTRC
GenProp0868uncharacterized protein pair with twin-arg and repeat
GenProp0894Actinobacterial uncharacterized trio
GenProp0916radical SAM/uncharacterized protein TIGR03936 system
GenProp0940metallo-mystery pair
GenProp0959radical SAM/uncharacterized protein TIGR04002 system
GenProp0965YedE/YedF selenium handling system
GenProp1063Memo/AMMECR1/rSAM family trio system
GenProp1066uncharacterized cassette GAK (Grasp, Amphipathic, Kinase)
GenProp1086Firmicutes/Treponema mobile radical SAM system