Genome Property Definition Page
Accession | GenProp0763 | |
Name | nicotinate fermentation to pyruvate and propionate | |
Type | PATHWAY | |
Description | This property represents one of a number of distinct catabolic pathways for nicotinate (niacin, vitamin B3), a nine-enzyme anaerobic fermentation to pyruvate and propionate as in the anaerobic soil bacterium Eubacterium barkeri. The nicotinate dehydrogenase in E. barkeri is a four-subunit enzyme with a non-selenocysteine selenium that belongs to a family of selenium-dependent molybdenum hydroxylases. | |
JCVI Role | Other | |
Parent Property | GenProp0142: catabolism GenProp0298: fermentation | |
Literature References |
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Gene Ontology Term | GO:0046497: nicotinate nucleotide metabolic process (biological_process) |
Components
Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
---|---|---|---|---|
nicotinate dehydrogenase, FAD subunit | n1_ndhF | YES | 2080 (RULE_BASE) | GO:0046497: nicotinate nucleotide metabolic process |
nicotinate dehydrogenase, NdhL subunit | n1_ndhL | YES | ||
nicotinate dehydrogenase, NdhM subunit | n1_ndhM | YES | ||
nicotinate dehydrogenase, 2x[2Fe-2S] subunit | n1_ndhS | YES | 2081 (RULE_BASE) | GO:0046497: nicotinate nucleotide metabolic process |
6-hydroxynicotinate reductase (1.3.7.1) | nic_2 | YES | ||
enamidase (3.5.2.18) | nic_3 | YES | 2082 (RULE_BASE) | GO:0046497: nicotinate nucleotide metabolic process |
2-hydroxymethylglutarate dehydrogenase (1.1.1.291) | nic_4 | YES | ||
2-hydroxymethylglutarate dehydratase | nic_5 | YES | ||
2-methyleneglutarate mutase (5.4.99.4) | nic_6 | YES | 2079 (RULE_BASE) | GO:0046497: nicotinate nucleotide metabolic process |
methylitaconate Delta-isomerase (5.3.3.6) | nic_7 | YES | ||
dimethylmaleate hydratase (4.2.1.85) | nic_8 | YES | ||
2,3-dimethylmalate lyase (4.1.3.32) | nic_9 | YES |
Parent Properties
Accession | Name |
---|---|
GenProp0142 | catabolism |
GenProp0298 | fermentation |
Sibling Properties
Accession | Name |
---|---|
GenProp0055 | polyhydroxyalkanoic acids |
GenProp0141 | galactose-6-phosphate degradation via tagatose-6-phosphate |
GenProp0156 | cyanophycin-like storage polymers |
GenProp0168 | glycogen system |
GenProp0210 | phenylacetic acid catabolism |
GenProp0231 | 4-hydroxyphenylacetate degradation |
GenProp0233 | GABA utilization |
GenProp0238 | 2-aminoethylphosphonate catabolism to acetaldehyde |
GenProp0239 | propionyl-CoA catabolism |
GenProp0241 | phosphonate catabolism |
GenProp0271 | trehalose utilization |
GenProp0272 | pyruvate fermentation to acetoin |
GenProp0273 | protocatechuate degradation to beta-ketoadipate |
GenProp0283 | beta-ketoadipate degradation to succinyl-CoA and acetyl-CoA |
GenProp0294 | ethanolamine degradation proteinaceous organelle |
GenProp0457 | rhamnose catabolism |
GenProp0458 | fucose catabolism |
GenProp0461 | utilization of deoxynucleosides |
GenProp0653 | ectoine catabolism |
GenProp0674 | malonate decarboxylase |
GenProp0686 | allantoin catabolism to glyoxalate and urea |
GenProp0687 | allantoin catabolism to oxamate and carbamoyl-phosphate |
GenProp0688 | urate catabolism to allantoin |
GenProp0691 | glycolysis |
GenProp0693 | fructose utilization as fructose-1,6-bisphosphate |
GenProp0694 | glucose utilization as fructose-1,6-bisphosphate |
GenProp0700 | purine catabolism via urate, xanthine and allantoin |
GenProp0702 | benzoyl-CoA reductase |
GenProp0703 | 4-hydroxybenzoyl-CoA reductase |
GenProp0706 | cyclohexa-1,5-diene-1-carbonyl-CoA to 3-hydroxypimelyl-CoA, dch/had/oah pathway |
GenProp0708 | catechol meta-cleavage pathway |
GenProp0709 | benzoate catabolism BoxABC pathway |
GenProp0711 | catechol ortho-cleavage upper pathway |
GenProp0714 | galactarate utilization via tartronate semi-aldehyde |
GenProp0715 | galactarate utilization via 2-oxoglutarate semialdehyde |
GenProp0716 | glucarate utilization via tartronate semi-aldehyde |
GenProp0717 | glucarate utilization via 2-oxoglutarate semialdehyde |
GenProp0718 | oxalate degradation |
GenProp0734 | amino acid catabolism |
GenProp0749 | choline sulfate utilization |
GenProp0760 | putrescine degradation to GABA via gamma-glutamylation |
GenProp0810 | encapsulin proteinaceous organelle |
GenProp0813 | pyrimidine utilization operon, RutABCDEFGR |
GenProp0902 | quinohemoprotein amine dehydrogenase |
GenProp1071 | myo-inositol catabolism |
GenProp1072 | cyanase system |
GenProp1076 | choline TMA-lyase system |
GenProp0765 | glycerol fermentation to 1,3-propanediol, using glycerol dehydratase |