Genome Property Definition Page

AccessionGenProp0836
Namemenaquinone biosynthesis
TypeMETAPATH
DescriptionMenaquinone may be synthesized by one of two independent pathways. The better known pathway, which includes MenA, MenB, etc., as found in Escherichia coli, passes through the intermediate SEPHCHC (see GenProp0058). An alternate pathway, found in both Helicobacter pylori and Streptomyces coelicolor, involves the intermediate futalosine (see GenProp0829). This property evaluates to YES is either menaquinone biosynthesis pathway is complete.
Parent PropertyGenProp0184: cofactor biosynthesis
GenProp0838: lipid biosynthesis

Components
Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
menaquinone biosynthesis: SEPHCHC or futalosinemenaquinYESGenProp0058 (GENPROP): menaquinone biosynthesis via SEPHCHC
GenProp0829 (GENPROP): menaquinone biosynthesis via futalosine

Parent Properties
AccessionName
GenProp0184cofactor biosynthesis
GenProp0838lipid biosynthesis

Child Properties
AccessionName
GenProp0058menaquinone biosynthesis via SEPHCHC
GenProp0829menaquinone biosynthesis via futalosine

Sibling Properties
AccessionName
GenProp0001chorismate biosynthesis via shikimate
GenProp0030glutathione biosynthesis
GenProp0036biotin biosynthesis
GenProp0038tetrahydrofolate biosynthesis from GTP and PABA
GenProp0057NAD(P) biosynthesis from L-aspartate and DHAP
GenProp0112riboflavin, FAD and FMN from GTP and ribulose-5-P
GenProp0124pantothenate biosynthesis from aspartate and 2-oxoisovalerate
GenProp0136ubiquinone biosynthesis from chorismate, aerobic
GenProp0140iron-sulfur cluster assembly systems
GenProp0170coenzyme PQQ biosynthesis
GenProp0171coenzyme A biosynthesis from pantothenate
GenProp0194siroheme biosynthesis from uroporphrinogen-III
GenProp0220uroporhyrinogen III biosynthesis from 5-aminolevulinate
GenProp0221protoporphyrin IX biosynthesis from uroporphyrinogen III
GenProp0222protoheme from protoporphyrin IX
GenProp0250thiamine: hydroxyethylthiazole from 1-deoxy-D-xylulose-5-phosphate, cysteine, either Tyr or Gly
GenProp02555-aminolevulinate biosynthesis
GenProp0261thiamin pyrophosphate (TPP) de novo biosynthesis
GenProp0274coenzyme B12 biosynthesis - overview
GenProp0300photosynthetic cofactor biosynthesis
GenProp0466molybdopterin biosynthesis
GenProp0752ergothioneine biosynthesis
GenProp0753mycothiol biosynthesis
GenProp0759para-aminobenzoic acid (PABA) biosynthesis from chorismate
GenProp0791coenzyme F420 biosynthesis
GenProp07927,8-didemethyl-8-hydroxy-5-deazariboflavin (FO) biosynthesis
GenProp0860tryptophan tryptophylquinone modification of methylamine dehydrogenase
GenProp0862pyridoxal phosphate biosynthesis, PdxA/PdxJ pathway
GenProp0863pyridoxal phosphate biosynthesis, Pdx1/Pdx2 pathway
GenProp0891coenzyme M biosynthesis
GenProp0917mycofactocin system
GenProp0927bacillithiol biosynthesis
GenProp1064ovothiol biosynthesis
GenProp0046IPP biosynthesis
GenProp0297lipopolysaccharide biosynthesis
GenProp0299fatty acid biosynthesis
GenProp0758lycopene biosynthesis from IPP
GenProp0761hopanoid lipid biosynthesis
GenProp08371-acylglycerol-3-phosphate biosynthesis, PlsX/Y pathway