Genome Property Definition Page

AccessionGenProp0858
Nameconjugative transposon, Bacteroides type
TypeSYSTEM
DescriptionThis property describes a class of conjugative transposon, including CTnDOT and related elements, from various Bacteroides and related species. These self-transmissable elements can be fairly large, 50-100 Kb, and contain proteins required for integration, excision, and conjugation. A single genome, such as Bacteroides thetaiotaomicron VPI-5482, may contain several such elements.
JCVI RoleTransposon functions
Parent PropertyGenProp0076: DNA handling
GenProp0076: DNA handling
Literature References
[ 1 ] Cheng Q, Paszkiet BJ, Shoemaker NB, Gardner JF, Salyers AA   Integration and excision of a Bacteroides conjugative transposon, CTnDOT.   J Bacteriol. 2000 Jul;182(14):4035-43.  PMID 10869083
[ 1 ] Cheng Q, Paszkiet BJ, Shoemaker NB, Gardner JF, Salyers AA   Integration and excision of a Bacteroides conjugative transposon, CTnDOT.   J Bacteriol. 2000 Jul;182(14):4035-43.  PMID 10869083

Components
Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
Bacteroides conjugative transposon TraG proteinCnjTr_GYESTIGR03783 (HMM): Bacteroides conjugation system ATPase, TraG family
Bacteroides conjugative transposon TraG proteinCnjTr_GYESTIGR03783 (HMM): Bacteroides conjugation system ATPase, TraG family
Bacteroides conjugative transposon TraJ proteinCnjTr_JYESTIGR03782 (HMM): Bacteroides conjugative transposon TraJ protein
Bacteroides conjugative transposon TraJ proteinCnjTr_JYESTIGR03782 (HMM): Bacteroides conjugative transposon TraJ protein
Bacteroides conjugative transposon TraK proteinCnjTr_KYESTIGR03781 (HMM): Bacteroides conjugative transposon TraK protein
Bacteroides conjugative transposon TraK proteinCnjTr_KYESTIGR03781 (HMM): Bacteroides conjugative transposon TraK protein
Bacteroides conjugative transposon TraM proteinCnjTr_MYESTIGR03779 (HMM): Bacteroides conjugative transposon TraM protein
Bacteroides conjugative transposon TraM proteinCnjTr_MYESTIGR03779 (HMM): Bacteroides conjugative transposon TraM protein
Bacteroides conjugative transposon TraN proteinCnjTr_NYESTIGR03780 (HMM): Bacteroides conjugative transposon TraN protein
Bacteroides conjugative transposon TraN proteinCnjTr_NYESTIGR03780 (HMM): Bacteroides conjugative transposon TraN protein

Parent Properties
AccessionName
GenProp0076DNA handling
GenProp0076DNA handling


Sibling Properties
AccessionName
GenProp0018natural transformation
GenProp0056type IV pilus
GenProp0115DNA repair
GenProp0198ruvABC Holliday junction complex
GenProp0311competence-related genes
GenProp0489F-type conjugation system
GenProp0490Ti-type conjugation system
GenProp0699DNA gyrase
GenProp0851integration host factor
GenProp0855integrating conjugative element, PFGI-1 class