Genome Property Definition Page

AccessionGenProp0898
NameRNA ligase/unknown protein pair
TypeSYSTEM
DescriptionThis property describes the pairing of two proteins, one of which is characterized as a ligase capable of circularizing RNA. The genes for the two proteins are only occasionally near to each other on the chromosome and then not in the form of an operon.
JCVI RoleGeneral
Parent PropertyGenProp0819: RNA metabolism
GenProp0819: RNA metabolism
GenProp0819: RNA metabolism

Components
Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
RNA ligase, Pab1020 familyligaseYESTIGR01209 (HMM): RNA ligase, Pab1020 family
RNA ligase, Pab1020 familyligaseYESTIGR01209 (HMM): RNA ligase, Pab1020 family
RNA ligase, Pab1020 familyligaseYESTIGR01209 (HMM): RNA ligase, Pab1020 family
RNA ligase partner, MJ_0950 familywithLigYESTIGR03875 (HMM): RNA ligase partner, MJ_0950 family
RNA ligase partner, MJ_0950 familywithLigYESTIGR03875 (HMM): RNA ligase partner, MJ_0950 family
RNA ligase partner, MJ_0950 familywithLigYESTIGR03875 (HMM): RNA ligase partner, MJ_0950 family

Parent Properties
AccessionName
GenProp0819RNA metabolism
GenProp0819RNA metabolism
GenProp0819RNA metabolism


Sibling Properties
AccessionName
GenProp0258tRNA aminoacylation
GenProp0262RNA polymerase, bacterial
GenProp04826S RNA (eubacterial RNA polymerase regulator)
GenProp0677queuosine (Q-tRNA) biosynthesis from preQ0
GenProp0692selenouridine-containing tRNA
GenProp0704tRNA U34 carboxymethylaminomethyl modification
GenProp0948RNA repair, Hen1/Pnkp system
GenProp1060tRNA N6-threonylcarbamoyladenosine modification
GenProp1077tRNA(Pro) cmo5UGG modification
GenProp108216S rRNA C1402 m(4)Cm modification