Genome Property Definition Page

AccessionGenProp0907
Namepoly-beta-1,6 N-acetyl-D-glucosamine system, PgaABCD type
TypeSYSTEM
DescriptionThis property describes the biosynthesis and delivery of a polysaccharide adhesin based on poly-beta-1,6-N-acetyl-D-glucosamine, partially N-deacetylated, as the system occurs in Gram-negative bacteria with a requirement for transit across the outer membrane. A related system, termed PIA (polysaccharide intercellular adhesin), occurs in certain Gram-positive species.
JCVI RoleBiosynthesis and degradation of surface polysaccharides and lipopolysaccharides
Parent PropertyGenProp0186: storage and structural polymer biosynthesis
GenProp0186: storage and structural polymer biosynthesis
GenProp0186: storage and structural polymer biosynthesis
Literature References
[ 1 ]Itoh Y, Rice JD, Goller C, Pannuri A, Taylor J, Meisner J, Beveridge TJ, Preston JF 3rd, Romeo T  Roles of pgaABCD genes in synthesis, modification, and export of the Escherichia coli biofilm adhesin poly-beta-1,6-N-acetyl-D-glucosamine.  J Bacteriol. 2008 May;190(10):3670-80. Epub 2008 Mar 21.  PMID 18359807
[ 1 ]Itoh Y, Rice JD, Goller C, Pannuri A, Taylor J, Meisner J, Beveridge TJ, Preston JF 3rd, Romeo T  Roles of pgaABCD genes in synthesis, modification, and export of the Escherichia coli biofilm adhesin poly-beta-1,6-N-acetyl-D-glucosamine.  J Bacteriol. 2008 May;190(10):3670-80. Epub 2008 Mar 21.  PMID 18359807
[ 1 ]Itoh Y, Rice JD, Goller C, Pannuri A, Taylor J, Meisner J, Beveridge TJ, Preston JF 3rd, Romeo T  Roles of pgaABCD genes in synthesis, modification, and export of the Escherichia coli biofilm adhesin poly-beta-1,6-N-acetyl-D-glucosamine.  J Bacteriol. 2008 May;190(10):3670-80. Epub 2008 Mar 21.  PMID 18359807
Gene Ontology TermGO:0015774: polysaccharide transport (biological_process)
GO:0015774: polysaccharide transport (biological_process)
GO:0015774: polysaccharide transport (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0045226: extracellular polysaccharide biosynthetic process (biological_process)
GO:0045226: extracellular polysaccharide biosynthetic process (biological_process)
GO:0045226: extracellular polysaccharide biosynthetic process (biological_process)
GO:0015774: polysaccharide transport (biological_process)
GO:0015774: polysaccharide transport (biological_process)
GO:0015774: polysaccharide transport (biological_process)
GO:0045226: extracellular polysaccharide biosynthetic process (biological_process)
GO:0045226: extracellular polysaccharide biosynthetic process (biological_process)
GO:0045226: extracellular polysaccharide biosynthetic process (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0015774: polysaccharide transport (biological_process)
GO:0015774: polysaccharide transport (biological_process)
GO:0015774: polysaccharide transport (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0042710: biofilm formation (biological_process)
GO:0045226: extracellular polysaccharide biosynthetic process (biological_process)
GO:0045226: extracellular polysaccharide biosynthetic process (biological_process)
GO:0045226: extracellular polysaccharide biosynthetic process (biological_process)

Components
Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
poly-beta-1,6 N-acetyl-D-glucosamine export porinPgaAYESTIGR03939 (HMM): poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaAGO:0015774: polysaccharide transport
GO:0042710: biofilm formation
poly-beta-1,6 N-acetyl-D-glucosamine export porinPgaAYESTIGR03939 (HMM): poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaAGO:0015774: polysaccharide transport
GO:0042710: biofilm formation
poly-beta-1,6 N-acetyl-D-glucosamine export porinPgaAYESTIGR03939 (HMM): poly-beta-1,6 N-acetyl-D-glucosamine export porin PgaAGO:0015774: polysaccharide transport
GO:0042710: biofilm formation
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylasePgaBYESTIGR03938 (HMM): poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaBGO:0045226: extracellular polysaccharide biosynthetic process
GO:0042710: biofilm formation
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylasePgaBYESTIGR03938 (HMM): poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaBGO:0045226: extracellular polysaccharide biosynthetic process
GO:0042710: biofilm formation
poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylasePgaBYESTIGR03938 (HMM): poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaBGO:0045226: extracellular polysaccharide biosynthetic process
GO:0042710: biofilm formation
poly-beta-1,6 N-acetyl-D-glucosamine synthasePgaCYESTIGR03937 (HMM): poly-beta-1,6 N-acetyl-D-glucosamine synthaseGO:0045226: extracellular polysaccharide biosynthetic process
GO:0042710: biofilm formation
poly-beta-1,6 N-acetyl-D-glucosamine synthasePgaCYESTIGR03937 (HMM): poly-beta-1,6 N-acetyl-D-glucosamine synthaseGO:0045226: extracellular polysaccharide biosynthetic process
GO:0042710: biofilm formation
poly-beta-1,6 N-acetyl-D-glucosamine synthasePgaCYESTIGR03937 (HMM): poly-beta-1,6 N-acetyl-D-glucosamine synthaseGO:0045226: extracellular polysaccharide biosynthetic process
GO:0042710: biofilm formation
poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaDPgaDYESTIGR03940 (HMM): poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaDGO:0045226: extracellular polysaccharide biosynthetic process
GO:0042710: biofilm formation
poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaDPgaDYESTIGR03940 (HMM): poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaDGO:0045226: extracellular polysaccharide biosynthetic process
GO:0042710: biofilm formation
poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaDPgaDYESTIGR03940 (HMM): poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaDGO:0045226: extracellular polysaccharide biosynthetic process
GO:0042710: biofilm formation

Parent Properties
AccessionName
GenProp0186storage and structural polymer biosynthesis
GenProp0186storage and structural polymer biosynthesis
GenProp0186storage and structural polymer biosynthesis


Sibling Properties
AccessionName
GenProp0055polyhydroxyalkanoic acids
GenProp0156cyanophycin-like storage polymers
GenProp0158peptidoglycan(murein) biosynthesis
GenProp0168glycogen system
GenProp0183dTDP-L-rhamnose biosynthesis from dTDP-4-dehydro-L-rhamnose
GenProp0297lipopolysaccharide biosynthesis
GenProp0652exopolysaccharide biosynthesis, exosortase A-associated
GenProp0655exopolysaccharide biosynthesis, exosortase B-associated
GenProp0658cellulose biosynthesis
GenProp0793CMP-N-acetylneuraminate biosynthesis from UDP-N-acetylglucosamine
GenProp0822poly(gamma-glutamic acid) biosynthesis
GenProp0906poly-beta-1,6 N-acetyl-D-glucosamine system, IcaADBC type