Genome Property Definition Page

AccessionGenProp0922
NameCRISPR system, Myxan subtype
TypeSYSTEM
DescriptionThis Genome Property describes a subtype of CRISPR/Cas system as found in Myxococcus xanthus near locus MXAN_7263, in Leptospira interrogans, in Anabaena variabilis ATCC 29413, Lyngbya sp. PCC 8106, Cyanothece, etc. Repeats average about 36 base pairs in length. A typical repeat is GTGCCGCTCGCCGTGATGCCGGAAGGCGTTGAGCAC. Interestingly, this system includes the DevR and DevS proteins of Myxococcus, which have been recruited to demonstrable roles in fruiting body development.
Parent PropertyGenProp0021: CRISPR region

Components
Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
CRISPR-associated protein Cas1, MYXAN subtypecas1cmxYESTIGR03983 (HMM): CRISPR-associated endonuclease Cas1, subtype MYXAN
CRISPR-associated protein Cas2, MYXAN subtypecas2cmxYESTIGR01573 (HMM-CLUST): CRISPR-associated endoribonuclease Cas2
Cas3, MYXAN regioncas3cmxYESTIGR01587 (HMM-CLUST): CRISPR-associated helicase Cas3
CRISPR-associated protein Cas4, MYXAN subtypecas4cmxYESTIGR00372 (HMM-CLUST): CRISPR-associated protein Cas4
CRISPR-associated protein Csx13, C-terminal regioncmx1CYESTIGR03486 (HMM): CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype, C-terminal region
CRISPR-associated protein Csx13, N-terminal regioncmx1NYESTIGR03485 (HMM): CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype
CRISPR-associated protein DevScmx5YESTIGR02586 (HMM): CRISPR-associated protein Cas5/DevS, subtype MYXAN
CRISPR-associated protein Cas6, MYXAN subtypecmx6YESTIGR02807 (HMM): CRISPR-associated protein Cas6, subtype MYXAN
CRISPR-associated autoregulator, MYXAN subtypecmxREGYESTIGR01875 (HMM-CLUST): CRISPR-associated autoregulator DevR family

Parent Properties
AccessionName
GenProp0021CRISPR region


Sibling Properties
AccessionName
GenProp0310CRISPR system, Ypest subtype
GenProp0313CRISPR system, Dvulg subtype
GenProp0314CRISPR system, Nmeni subtype
GenProp0315CRISPR system, Ecoli subtype
GenProp0316CRISPR RAMP module
GenProp0317CRISPR system, Tneap subtype
GenProp0318CRISPR system, Mtube subtype (RAMP-like)
GenProp0319CRISPR system, Apern subtype (Archaea specific)
GenProp0320CRISPR system, Hmari subtype
GenProp0469CRISPR system, Dpsyc subtype
GenProp0670CRISPR system, Aferr subtype
GenProp0685CRISPR system, Cyano subtype
GenProp0768CRISPR system, Pging subtype
GenProp1061CRISPR system, PreFran subtype