Genome Property Definition Page
| Accession | GenProp0929 |
| Name | LPS outer core, E. coli type |
| Type | GUILD |
| Description | The LPS outer core of E. coli and related species contains a set of glucosamine and galactose sugar residues positioned between the inner core heptose residues and the O-antigen. The O-antigen is attached to the outer core via the terminal glucosamine residue. The precise structure of the outer core varies by serovar (strain). The genes for the outer core are often observed interspersed with the more highly conserved and more easily identifiable genes for the inner core. |
| Parent Property | GenProp0297: lipopolysaccharide biosynthesis |
Components
| Step Name | Step Num | Required | Evidence (Method) | Evidence Go Terms |
|---|---|---|---|---|
| LPS outer core glucosyltransferase I | WaaG | NO | PF00534 (MANUAL): glycosyltransferase, group 1 family | |
| LPS outer core 1,3-galactosyltransferase | WaaI | NO | PF01501 (MANUAL): glycosyltransferase family 8 | |
| LPS outer core 1,2-glactosyltransferase | WaaJ | NO | PF01501 (MANUAL): glycosyltransferase family 8 | |
| LPS outer core 1,2-N-acetylglucosamine transferase | WaaK | NO | PF00534 (MANUAL): glycosyltransferase, group 1 family |
Parent Properties
| Accession | Name |
|---|---|
| GenProp0297 | lipopolysaccharide biosynthesis |
Sibling Properties
| Accession | Name |
|---|---|
| GenProp0203 | LPS inner core biosynthesis, ketodeoxyoctonate and heptose type |
| GenProp0204 | KDO(2)-lipid A (Re LPS) biosynthesis and delivery |
| GenProp0925 | Leptospira core LPS elements |
| GenProp0966 | E. coli O-antigen biosynthesis |
| GenProp0994 | Leptospira interrogans-specific LPS components |
| GenProp0995 | Leptospira interrogans LPS associated transketolase |