Genome Property Definition Page

AccessionGenProp0932
NameO104(Ec) antigen biosynthesis
TypeMETAPATH
DescriptionThe O104 O-antigen is observed in E. coli strain 55989 and other EHEC strains. It consists of repeating of [->4)-a-D-Gal-(1->4)-a-Neu5,7,9Ac3-(2->3)-b-D-Gal-(1->3)b-D-GalNAc-(1-] units. The NeuABCD cassette for the biosynthesis of CMP-Neu5Ac is observed within the O-antigen cluster.
Parent PropertyGenProp0913: E. coli O-antigen monomer biosynthesis clusters
GenProp0913: E. coli O-antigen monomer biosynthesis clusters
GenProp0913: E. coli O-antigen monomer biosynthesis clusters

Components
Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
source of CMP-Neu5AcNeu5AcYESGenProp0793 (GENPROP): CMP-N-acetylneuraminate biosynthesis from UDP-N-acetylglucosamine
source of CMP-Neu5AcNeu5AcYESGenProp0793 (GENPROP): CMP-N-acetylneuraminate biosynthesis from UDP-N-acetylglucosamine
source of CMP-Neu5AcNeu5AcYESGenProp0793 (GENPROP): CMP-N-acetylneuraminate biosynthesis from UDP-N-acetylglucosamine
regulatory protein GalFgalFYESTIGR01105 (HMM-CLUST): regulatory protein GalF
regulatory protein GalFgalFYESTIGR01105 (HMM-CLUST): regulatory protein GalF
regulatory protein GalFgalFYESTIGR01105 (HMM-CLUST): regulatory protein GalF
clustered gnd enzymegndNOTIGR00873 (HMM-CLUST): 6-phosphogluconate dehydrogenase (decarboxylating)
clustered gnd enzymegndNOTIGR00873 (HMM-CLUST): 6-phosphogluconate dehydrogenase (decarboxylating)
clustered gnd enzymegndNOTIGR00873 (HMM-CLUST): 6-phosphogluconate dehydrogenase (decarboxylating)
source of UDP-GalNAcgneYES2732 (RULE_BASE)
source of UDP-GalNAcgneYES2732 (RULE_BASE)
source of UDP-GalNAcgneYES2732 (RULE_BASE)
a-Neu5Ac-(2->3)-b-D-Gal transferasewbwAYES2737 (RULE_BASE)
a-Neu5Ac-(2->3)-b-D-Gal transferasewbwAYES2737 (RULE_BASE)
a-Neu5Ac-(2->3)-b-D-Gal transferasewbwAYES2737 (RULE_BASE)
a-D-Gal-(1->4)-a-Neu5Ac transferasewbwBYES2739 (RULE_BASE)
a-D-Gal-(1->4)-a-Neu5Ac transferasewbwBYES2739 (RULE_BASE)
a-D-Gal-(1->4)-a-Neu5Ac transferasewbwBYES2739 (RULE_BASE)
b-D-Gal-(1->3)-b-D-GalNAc transferasewbwCYES2741 (RULE_BASE)
b-D-Gal-(1->3)-b-D-GalNAc transferasewbwCYES2741 (RULE_BASE)
b-D-Gal-(1->3)-b-D-GalNAc transferasewbwCYES2741 (RULE_BASE)
O104-antigen specific transporter (flippase)wzx104YES2740 (RULE_BASE)
O104-antigen specific transporter (flippase)wzx104YES2740 (RULE_BASE)
O104-antigen specific transporter (flippase)wzx104YES2740 (RULE_BASE)
O104-antigen-specific polymerasewzy104YES2738 (RULE_BASE)
O104-antigen-specific polymerasewzy104YES2738 (RULE_BASE)
O104-antigen-specific polymerasewzy104YES2738 (RULE_BASE)
O104-antigen specific chain length determinant proteinwzz104NOPF02706 (HMM-CLUST): chain length determinant protein
O104-antigen specific chain length determinant proteinwzz104NOPF02706 (HMM-CLUST): chain length determinant protein
O104-antigen specific chain length determinant proteinwzz104NOPF02706 (HMM-CLUST): chain length determinant protein

Parent Properties
AccessionName
GenProp0913E. coli O-antigen monomer biosynthesis clusters
GenProp0913E. coli O-antigen monomer biosynthesis clusters
GenProp0913E. coli O-antigen monomer biosynthesis clusters


Sibling Properties
AccessionName
GenProp0947O55(Ec) antigen biosynthesis
GenProp0949O111(Ec) antigen biosynthesis
GenProp0953O103(Ec) antigen biosynthesis
GenProp0963O2(Ec) antigen biosynthesis
GenProp1014O5(Ec) antigen biosynthesis
GenProp1018O8(Ec) antigen biosynthesis
GenProp1042O128(Ec) antigen biosynthesis