Genome Property Definition Page

AccessionGenProp0995
NameLeptospira interrogans LPS associated transketolase
TypeSYSTEM
DescriptionThis two subunit transketolase enzyme is very likely acting on a sugar other than sedoheptulose-7-phosphate. The two models included here are expected to narrowly detect this enzyme in strains of Leptospira interrogans.
JCVI RoleBiosynthesis and degradation of surface polysaccharides and lipopolysaccharides
Parent PropertyGenProp0297: lipopolysaccharide biosynthesis
GenProp0297: lipopolysaccharide biosynthesis
GenProp0297: lipopolysaccharide biosynthesis

Components
Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
Transketolase, thiamine diphosphate binding domain, LLPSF_CCT_00010 familyCCT0010YES2787 (RULE_BASE)
Transketolase, thiamine diphosphate binding domain, LLPSF_CCT_00010 familyCCT0010YES2787 (RULE_BASE)
Transketolase, thiamine diphosphate binding domain, LLPSF_CCT_00010 familyCCT0010YES2787 (RULE_BASE)
Transketolase, C-terminal domain, LLPSF_CCT_00011 familyCCT0011YES2788 (RULE_BASE)
Transketolase, C-terminal domain, LLPSF_CCT_00011 familyCCT0011YES2788 (RULE_BASE)
Transketolase, C-terminal domain, LLPSF_CCT_00011 familyCCT0011YES2788 (RULE_BASE)

Parent Properties
AccessionName
GenProp0297lipopolysaccharide biosynthesis
GenProp0297lipopolysaccharide biosynthesis
GenProp0297lipopolysaccharide biosynthesis


Sibling Properties
AccessionName
GenProp0203LPS inner core biosynthesis, ketodeoxyoctonate and heptose type
GenProp0204KDO(2)-lipid A (Re LPS) biosynthesis and delivery
GenProp0925Leptospira core LPS elements
GenProp0929LPS outer core, E. coli type
GenProp0966E. coli O-antigen biosynthesis
GenProp0994Leptospira interrogans-specific LPS components