Genome Property Definition Page

Accession	GenProp1008
Name	phlebovirus protein set
Type	SYSTEM
Description	This Genome Property collects HMMs that describe characteristic proteins from examples of Phlebovirus, segmented ssRNA animal viruses within the Bunyaviridae. Segment M: polyprotein with G1 and G2, and NSm (the 1-375 not described?). Segment S (ambisense): N and NS (NSs). Segment L (negative): polymerase.

Components

Step Name	Step Num	Required	Evidence (Method)
glycoprotein G1	Phl_G1	YES	PF07243 (HMM): phlebovirus glycoprotein G1
glycoprotein G2	Phl_G2	YES	PF07245 (HMM): phlebovirus glycoprotein G2
RNA polymerase N-terminal domain	Phl_L_n	NO	PF12603 (HMM): PF12603 family
nucleocapsid protein	Phl_N	YES	PF05733 (HMM): tenuivirus/phlebovirus nucleocapsid protein
nonstructural protein NSm	Phl_NSm	NO	PF07246 (HMM): phlebovirus nonstructural protein NS-M
nonstructural protein NSs	Phl_NSs	NO	PF11073 (HMM): rift valley fever virus non structural protein (NSs)-like
RNA dependent RNA polymerase	Phl_pol	YES	PF04196 (HMM): bunyavirus RNA dependent RNA polymerase