Genome Property Definition Page

AccessionGenProp1044
NameTransposon components
TypeMETAPATH
DescriptionThis property collects transposases and related integrases.
JCVI RoleTransposon functions

Components
Step NameStep NumRequiredEvidence (Method)Evidence Go Terms
87kDa Transposase87kDaYESPF12596 (HMM): 87kDa Transposase
PF12596 (HMM): 87kDa Transposase
87kDa Transposase87kDaYESPF12596 (HMM): 87kDa Transposase
PF12596 (HMM): 87kDa Transposase
87kDa Transposase87kDaYESPF12596 (HMM): 87kDa Transposase
PF12596 (HMM): 87kDa Transposase
hermes transposase DNA-binding domainHermesYESPF10683 (HMM): hermes transposase DNA-binding domain
PF10683 (HMM): hermes transposase DNA-binding domain
hermes transposase DNA-binding domainHermesYESPF10683 (HMM): hermes transposase DNA-binding domain
PF10683 (HMM): hermes transposase DNA-binding domain
hermes transposase DNA-binding domainHermesYESPF10683 (HMM): hermes transposase DNA-binding domain
PF10683 (HMM): hermes transposase DNA-binding domain
IS1 transposaseIS1YESPF03400 (HMM): IS1 transposase
PF03400 (HMM): IS1 transposase
IS1 transposaseIS1YESPF03400 (HMM): IS1 transposase
PF03400 (HMM): IS1 transposase
IS1 transposaseIS1YESPF03400 (HMM): IS1 transposase
PF03400 (HMM): IS1 transposase
IS 150 transposase orfAIS150YES2920 (RULE_BASE)

2920 (RULE_BASE)
IS 150 transposase orfAIS150YES2920 (RULE_BASE)

2920 (RULE_BASE)
IS 150 transposase orfAIS150YES2920 (RULE_BASE)

2920 (RULE_BASE)
transposase C of IS166 homeodomainIS166_CYESPF13007 (HMM): IS166 homeodomain transposase C
PF13007 (HMM): IS166 homeodomain transposase C
transposase C of IS166 homeodomainIS166_CYESPF13007 (HMM): IS166 homeodomain transposase C
PF13007 (HMM): IS166 homeodomain transposase C
transposase C of IS166 homeodomainIS166_CYESPF13007 (HMM): IS166 homeodomain transposase C
PF13007 (HMM): IS166 homeodomain transposase C
IS200 like transposase (Transposase_17)IS200YESPF01797 (HMM): transposase IS200 like
PF01797 (HMM): transposase IS200 like
IS200 like transposase (Transposase_17)IS200YESPF01797 (HMM): transposase IS200 like
PF01797 (HMM): transposase IS200 like
IS200 like transposase (Transposase_17)IS200YESPF01797 (HMM): transposase IS200 like
PF01797 (HMM): transposase IS200 like
transposase, IS4 familyIS4YESPF01609 (HMM): transposase, IS4 family
PF01609 (HMM): transposase, IS4 family
transposase, IS4 familyIS4YESPF01609 (HMM): transposase, IS4 family
PF01609 (HMM): transposase, IS4 family
transposase, IS4 familyIS4YESPF01609 (HMM): transposase, IS4 family
PF01609 (HMM): transposase, IS4 family
insertion element 4 transposase N-terminalIS4_NYESPF13006 (HMM): insertion element 4 transposase N-terminal
PF13006 (HMM): insertion element 4 transposase N-terminal
insertion element 4 transposase N-terminalIS4_NYESPF13006 (HMM): insertion element 4 transposase N-terminal
PF13006 (HMM): insertion element 4 transposase N-terminal
insertion element 4 transposase N-terminalIS4_NYESPF13006 (HMM): insertion element 4 transposase N-terminal
PF13006 (HMM): insertion element 4 transposase N-terminal
transposase, IS605 OrfB familyIS605-BYESPF01385 (HMM): transposase, IS605 family
TIGR01766 (HMM): transposase, IS605 OrfB family
PF01385 (HMM): transposase, IS605 family
TIGR01766 (HMM): transposase, IS605 OrfB family
transposase, IS605 OrfB familyIS605-BYESPF01385 (HMM): transposase, IS605 family
TIGR01766 (HMM): transposase, IS605 OrfB family
PF01385 (HMM): transposase, IS605 family
TIGR01766 (HMM): transposase, IS605 OrfB family
transposase, IS605 OrfB familyIS605-BYESPF01385 (HMM): transposase, IS605 family
TIGR01766 (HMM): transposase, IS605 OrfB family
PF01385 (HMM): transposase, IS605 family
TIGR01766 (HMM): transposase, IS605 OrfB family
Transposase IS66 familyIS66YESPF03050 (HMM): IS66 family element, transposase
PF03050 (HMM): IS66 family element, transposase
Transposase IS66 familyIS66YESPF03050 (HMM): IS66 family element, transposase
PF03050 (HMM): IS66 family element, transposase
Transposase IS66 familyIS66YESPF03050 (HMM): IS66 family element, transposase
PF03050 (HMM): IS66 family element, transposase
putative helix-turn-helix domain of transposase IS66IS66_HTHYESPF13005 (HMM): IS66 family transposase zinc-finger binding domain
PF13005 (HMM): IS66 family transposase zinc-finger binding domain
putative helix-turn-helix domain of transposase IS66IS66_HTHYESPF13005 (HMM): IS66 family transposase zinc-finger binding domain
PF13005 (HMM): IS66 family transposase zinc-finger binding domain
putative helix-turn-helix domain of transposase IS66IS66_HTHYESPF13005 (HMM): IS66 family transposase zinc-finger binding domain
PF13005 (HMM): IS66 family transposase zinc-finger binding domain
archaeal putative transposase ISC1217ISC1217YESPF04693 (HMM): archaeal putative transposase ISC1217
PF04693 (HMM): archaeal putative transposase ISC1217
archaeal putative transposase ISC1217ISC1217YESPF04693 (HMM): archaeal putative transposase ISC1217
PF04693 (HMM): archaeal putative transposase ISC1217
archaeal putative transposase ISC1217ISC1217YESPF04693 (HMM): archaeal putative transposase ISC1217
PF04693 (HMM): archaeal putative transposase ISC1217
ISPsy8, transposase OrfAISPsy8YES2916 (RULE_BASE)

2916 (RULE_BASE)
ISPsy8, transposase OrfAISPsy8YES2916 (RULE_BASE)

2916 (RULE_BASE)
ISPsy8, transposase OrfAISPsy8YES2916 (RULE_BASE)

2916 (RULE_BASE)
integrase core domain proteinIgr-coreYESPF00665 (HMM): integrase core domain
PF00665 (HMM): integrase core domain
integrase core domain proteinIgr-coreYESPF00665 (HMM): integrase core domain
PF00665 (HMM): integrase core domain
integrase core domain proteinIgr-coreYESPF00665 (HMM): integrase core domain
PF00665 (HMM): integrase core domain
MULE transposase domainMULEYESPF10551 (HMM): MULE transposase domain
PF10551 (HMM): MULE transposase domain
MULE transposase domainMULEYESPF10551 (HMM): MULE transposase domain
PF10551 (HMM): MULE transposase domain
MULE transposase domainMULEYESPF10551 (HMM): MULE transposase domain
PF10551 (HMM): MULE transposase domain
PD-(D/E)XK nuclease family transposasePDDEXKYESPF12784 (HMM): PD-(D/E)XK nuclease family transposase
PF12784 (HMM): PD-(D/E)XK nuclease family transposase
PD-(D/E)XK nuclease family transposasePDDEXKYESPF12784 (HMM): PD-(D/E)XK nuclease family transposase
PF12784 (HMM): PD-(D/E)XK nuclease family transposase
PD-(D/E)XK nuclease family transposasePDDEXKYESPF12784 (HMM): PD-(D/E)XK nuclease family transposase
PF12784 (HMM): PD-(D/E)XK nuclease family transposase
Tc3 transposaseTc3YESPF11427 (HMM): Tc3 transposase
PF11427 (HMM): Tc3 transposase
Tc3 transposaseTc3YESPF11427 (HMM): Tc3 transposase
PF11427 (HMM): Tc3 transposase
Tc3 transposaseTc3YESPF11427 (HMM): Tc3 transposase
PF11427 (HMM): Tc3 transposase
Tc5 transposase C-terminal domainTc5_CYESPF04236 (HMM): Tc5 transposase C-terminal domain
PF04236 (HMM): Tc5 transposase C-terminal domain
Tc5 transposase C-terminal domainTc5_CYESPF04236 (HMM): Tc5 transposase C-terminal domain
PF04236 (HMM): Tc5 transposase C-terminal domain
Tc5 transposase C-terminal domainTc5_CYESPF04236 (HMM): Tc5 transposase C-terminal domain
PF04236 (HMM): Tc5 transposase C-terminal domain
Tc5 transposase DNA-binding domainTc5_DNAYESPF03221 (HMM): Tc5 transposase DNA-binding domain
PF03221 (HMM): Tc5 transposase DNA-binding domain
Tc5 transposase DNA-binding domainTc5_DNAYESPF03221 (HMM): Tc5 transposase DNA-binding domain
PF03221 (HMM): Tc5 transposase DNA-binding domain
Tc5 transposase DNA-binding domainTc5_DNAYESPF03221 (HMM): Tc5 transposase DNA-binding domain
PF03221 (HMM): Tc5 transposase DNA-binding domain
Tn3 transposase DDE domainTn3-DDEYESPF01526 (HMM): Tn3 transposase DDE domain
PF01526 (HMM): Tn3 transposase DDE domain
Tn3 transposase DDE domainTn3-DDEYESPF01526 (HMM): Tn3 transposase DDE domain
PF01526 (HMM): Tn3 transposase DDE domain
Tn3 transposase DDE domainTn3-DDEYESPF01526 (HMM): Tn3 transposase DDE domain
PF01526 (HMM): Tn3 transposase DDE domain
Transposase Tn5 dimerisation domainTn5_dimYESPF02281 (HMM): transposase Tn5 dimerization domain
PF02281 (HMM): transposase Tn5 dimerization domain
Transposase Tn5 dimerisation domainTn5_dimYESPF02281 (HMM): transposase Tn5 dimerization domain
PF02281 (HMM): transposase Tn5 dimerization domain
Transposase Tn5 dimerisation domainTn5_dimYESPF02281 (HMM): transposase Tn5 dimerization domain
PF02281 (HMM): transposase Tn5 dimerization domain
PFAM Transposase_8 (IS3 family)Ts8-IS3YESPF01527 (HMM): transposase
PF01527 (HMM): transposase
PFAM Transposase_8 (IS3 family)Ts8-IS3YESPF01527 (HMM): transposase
PF01527 (HMM): transposase
PFAM Transposase_8 (IS3 family)Ts8-IS3YESPF01527 (HMM): transposase
PF01527 (HMM): transposase
Transposase_1, includes marinerTsp_1YESPF01359 (HMM): transposase (partial DDE domain)
PF01359 (HMM): transposase (partial DDE domain)
Transposase_1, includes marinerTsp_1YESPF01359 (HMM): transposase (partial DDE domain)
PF01359 (HMM): transposase (partial DDE domain)
Transposase_1, includes marinerTsp_1YESPF01359 (HMM): transposase (partial DDE domain)
PF01359 (HMM): transposase (partial DDE domain)
Transposase_12, DDE_Tnp_ISL3Tsp_12YESPF01610 (HMM): transposase
PF01610 (HMM): transposase
Transposase_12, DDE_Tnp_ISL3Tsp_12YESPF01610 (HMM): transposase
PF01610 (HMM): transposase
Transposase_12, DDE_Tnp_ISL3Tsp_12YESPF01610 (HMM): transposase
PF01610 (HMM): transposase
Transposase_14, HTH_Tnp_IS630Tsp_14YESPF01710 (HMM): transposase
PF01710 (HMM): transposase
Transposase_14, HTH_Tnp_IS630Tsp_14YESPF01710 (HMM): transposase
PF01710 (HMM): transposase
Transposase_14, HTH_Tnp_IS630Tsp_14YESPF01710 (HMM): transposase
PF01710 (HMM): transposase
transposase, IS116/IS110/IS902 familyTsp_19YESPF02371 (HMM): transposase, IS116/IS110/IS902 family
PF02371 (HMM): transposase, IS116/IS110/IS902 family
transposase, IS116/IS110/IS902 familyTsp_19YESPF02371 (HMM): transposase, IS116/IS110/IS902 family
PF02371 (HMM): transposase, IS116/IS110/IS902 family
transposase, IS116/IS110/IS902 familyTsp_19YESPF02371 (HMM): transposase, IS116/IS110/IS902 family
PF02371 (HMM): transposase, IS116/IS110/IS902 family
transposase family Tnp2Tsp_21YESPF02992 (HMM): transposase family Tnp2
PF02992 (HMM): transposase family Tnp2
transposase family Tnp2Tsp_21YESPF02992 (HMM): transposase family Tnp2
PF02992 (HMM): transposase family Tnp2
transposase family Tnp2Tsp_21YESPF02992 (HMM): transposase family Tnp2
PF02992 (HMM): transposase family Tnp2
TNP1/EN/SPM transposaseTsp_23YESPF03017 (HMM): TNP1/EN/SPM transposase
PF03017 (HMM): TNP1/EN/SPM transposase
TNP1/EN/SPM transposaseTsp_23YESPF03017 (HMM): TNP1/EN/SPM transposase
PF03017 (HMM): TNP1/EN/SPM transposase
TNP1/EN/SPM transposaseTsp_23YESPF03017 (HMM): TNP1/EN/SPM transposase
PF03017 (HMM): TNP1/EN/SPM transposase
Transposase_32, Putative transposase, Y2_TnpTsp_32YESPF04986 (HMM): putative transposase
PF04986 (HMM): putative transposase
Transposase_32, Putative transposase, Y2_TnpTsp_32YESPF04986 (HMM): putative transposase
PF04986 (HMM): putative transposase
Transposase_32, Putative transposase, Y2_TnpTsp_32YESPF04986 (HMM): putative transposase
PF04986 (HMM): putative transposase
Transposase_35, putative transposase DNA-binding domain, OrfB_Zn_ribbonTsp_35YESPF07282 (HMM): putative transposase DNA-binding domain
PF07282 (HMM): putative transposase DNA-binding domain
Transposase_35, putative transposase DNA-binding domain, OrfB_Zn_ribbonTsp_35YESPF07282 (HMM): putative transposase DNA-binding domain
PF07282 (HMM): putative transposase DNA-binding domain
Transposase_35, putative transposase DNA-binding domain, OrfB_Zn_ribbonTsp_35YESPF07282 (HMM): putative transposase DNA-binding domain
PF07282 (HMM): putative transposase DNA-binding domain
Transposase_36, Rhodopirellula transposase, DDE_Tnp_ISAZ013Tsp_36YESPF07592 (HMM): Rhodopirellula transposase DDE domain
PF07592 (HMM): Rhodopirellula transposase DDE domain
Transposase_36, Rhodopirellula transposase, DDE_Tnp_ISAZ013Tsp_36YESPF07592 (HMM): Rhodopirellula transposase DDE domain
PF07592 (HMM): Rhodopirellula transposase DDE domain
Transposase_36, Rhodopirellula transposase, DDE_Tnp_ISAZ013Tsp_36YESPF07592 (HMM): Rhodopirellula transposase DDE domain
PF07592 (HMM): Rhodopirellula transposase DDE domain
Transposase_37, transposase protein, Tnp_P_elementTsp_37YESPF12017 (HMM): transposase protein
PF12017 (HMM): transposase protein
Transposase_37, transposase protein, Tnp_P_elementTsp_37YESPF12017 (HMM): transposase protein
PF12017 (HMM): transposase protein
Transposase_37, transposase protein, Tnp_P_elementTsp_37YESPF12017 (HMM): transposase protein
PF12017 (HMM): transposase protein
Transposase_38, ISXO2-like transposase domainTsp_38YESPF12762 (HMM): ISXO2-like transposase domain
PF12762 (HMM): ISXO2-like transposase domain
Transposase_38, ISXO2-like transposase domainTsp_38YESPF12762 (HMM): ISXO2-like transposase domain
PF12762 (HMM): ISXO2-like transposase domain
Transposase_38, ISXO2-like transposase domainTsp_38YESPF12762 (HMM): ISXO2-like transposase domain
PF12762 (HMM): ISXO2-like transposase domain
Transposase_9, DEDD_Tnp_IS110Tsp_9YESPF01548 (HMM): transposase
PF01548 (HMM): transposase
Transposase_9, DEDD_Tnp_IS110Tsp_9YESPF01548 (HMM): transposase
PF01548 (HMM): transposase
Transposase_9, DEDD_Tnp_IS110Tsp_9YESPF01548 (HMM): transposase
PF01548 (HMM): transposase
bacteriophage Mu transposaseTsp_MuYESPF02914 (HMM): bacteriophage Mu transposase
PF02914 (HMM): bacteriophage Mu transposase
bacteriophage Mu transposaseTsp_MuYESPF02914 (HMM): bacteriophage Mu transposase
PF02914 (HMM): bacteriophage Mu transposase
bacteriophage Mu transposaseTsp_MuYESPF02914 (HMM): bacteriophage Mu transposase
PF02914 (HMM): bacteriophage Mu transposase
Mu transposase, C-terminalTsp_MuCYESPF09299 (HMM): Mu transposase, C-terminal
PF09299 (HMM): Mu transposase, C-terminal
Mu transposase, C-terminalTsp_MuCYESPF09299 (HMM): Mu transposase, C-terminal
PF09299 (HMM): Mu transposase, C-terminal
Mu transposase, C-terminalTsp_MuCYESPF09299 (HMM): Mu transposase, C-terminal
PF09299 (HMM): Mu transposase, C-terminal
MuDR family transposaseTsp_MuDRYESPF03108 (HMM): MuDR family transposase
PF03108 (HMM): MuDR family transposase
MuDR family transposaseTsp_MuDRYESPF03108 (HMM): MuDR family transposase
PF03108 (HMM): MuDR family transposase
MuDR family transposaseTsp_MuDRYESPF03108 (HMM): MuDR family transposase
PF03108 (HMM): MuDR family transposase
plant transposase, Ptta/En/Spm familyTsp_PttaYESPF03004 (HMM): plant transposase, Ptta/En/Spm family
PF03004 (HMM): plant transposase, Ptta/En/Spm family
plant transposase, Ptta/En/Spm familyTsp_PttaYESPF03004 (HMM): plant transposase, Ptta/En/Spm family
PF03004 (HMM): plant transposase, Ptta/En/Spm family
plant transposase, Ptta/En/Spm familyTsp_PttaYESPF03004 (HMM): plant transposase, Ptta/En/Spm family
PF03004 (HMM): plant transposase, Ptta/En/Spm family
HTH_Tnp_Tc3_2, C. elegans, mariner relatedTsp_TcYESPF01498 (HMM): transposase
PF01498 (HMM): transposase
HTH_Tnp_Tc3_2, C. elegans, mariner relatedTsp_TcYESPF01498 (HMM): transposase
PF01498 (HMM): transposase
HTH_Tnp_Tc3_2, C. elegans, mariner relatedTsp_TcYESPF01498 (HMM): transposase
PF01498 (HMM): transposase
transposase, putative, N-terminal domainTsp_TengYESTIGR01765 (HMM): transposase, putative, N-terminal domain
TIGR01765 (HMM): transposase, putative, N-terminal domain
transposase, putative, N-terminal domainTsp_TengYESTIGR01765 (HMM): transposase, putative, N-terminal domain
TIGR01765 (HMM): transposase, putative, N-terminal domain
transposase, putative, N-terminal domainTsp_TengYESTIGR01765 (HMM): transposase, putative, N-terminal domain
TIGR01765 (HMM): transposase, putative, N-terminal domain
Zn_ribbon_3, transposase zinc-ribbon domain, Zn_Tnp_IS1595Tsp_Zn3YESPF12760 (HMM): transposase zinc-ribbon domain
PF12760 (HMM): transposase zinc-ribbon domain
Zn_ribbon_3, transposase zinc-ribbon domain, Zn_Tnp_IS1595Tsp_Zn3YESPF12760 (HMM): transposase zinc-ribbon domain
PF12760 (HMM): transposase zinc-ribbon domain
Zn_ribbon_3, transposase zinc-ribbon domain, Zn_Tnp_IS1595Tsp_Zn3YESPF12760 (HMM): transposase zinc-ribbon domain
PF12760 (HMM): transposase zinc-ribbon domain
putative transposase, YhgA-likeYhgA-lkYESPF04754 (HMM): putative transposase, YhgA-like
TIGR01784 (HMM): conserved hypothetical protein
PF04754 (HMM): putative transposase, YhgA-like
TIGR01784 (HMM): conserved hypothetical protein
putative transposase, YhgA-likeYhgA-lkYESPF04754 (HMM): putative transposase, YhgA-like
TIGR01784 (HMM): conserved hypothetical protein
PF04754 (HMM): putative transposase, YhgA-like
TIGR01784 (HMM): conserved hypothetical protein
putative transposase, YhgA-likeYhgA-lkYESPF04754 (HMM): putative transposase, YhgA-like
TIGR01784 (HMM): conserved hypothetical protein
PF04754 (HMM): putative transposase, YhgA-like
TIGR01784 (HMM): conserved hypothetical protein
transposase, mutator familymutatorYESPF00872 (HMM): transposase, mutator family
PF00872 (HMM): transposase, mutator family
transposase, mutator familymutatorYESPF00872 (HMM): transposase, mutator family
PF00872 (HMM): transposase, mutator family
transposase, mutator familymutatorYESPF00872 (HMM): transposase, mutator family
PF00872 (HMM): transposase, mutator family