Illumina Annotation

Annotation of Illumina contigs was carried out by the Plant Genomics group at the J. Craig Venter Institute, as illustrated by the pipeline below. This annotation pipeline uses the FGENESH gene finding software by Softberry and getorf (part of the EMBOSS package) to extract Open Reading Frames.

The annotation, searchable by keyword, gene identifier or chromosomal location can be found here. Sets of predicted coding sequences and proteins are available for blast searching and downloading.