Award #0321460
Award #0604966
Award #0821966

Medicago truncatula Mutant Gene Symbols

Frugoli, J.
List of M. truncatula Mutant Gene Symbols

Frugoli, J.. 2007; List of M. truncatula Mutant Gene Symbols. Medicago truncatula Mutant Nomenclature. Retrieved December 22, 2011.[more]

Mutant Class	Symbol Name	Mutant Symbol	Phenotype	Alleles	Mapping/Allelism Data	Reference Lab	Date Submitted/Updated	Reference
BIP	bi-pistil	-	two pistils: one develops into a normal shaped pod, while the second pistil shows much reduced size and rate of growth	0	not allelic to tap	Nair, Dundas & Randles	2012-02-15 18:29:53	-
BIT	branching infection threads	-	defective infection threads that abort in the outer epidermis or cortex	0	see ERN	Long & Oldroyd	2012-02-15 18:30:12	-
CMD	calcium morphology defective	CMD1	crystals are odd shaped and sporatic	0	not allelic to other cmd mutants	Nakata	2012-02-15 18:30:20	McConn & Nakata (2002)
		CMD2	crystals are odd shaped	0	not allelic to other cmd mutants	Nakata	2012-02-15 18:30:30	McConn & Nakata (2002)
		CMD3	crystals are odd shaped and smaller	0	not allelic to other cmd mutants	Nakata	2012-02-15 18:30:32	McConn & Nakata (2002)
		CMD4	crystals are rectangular	0	not allelic to other cmd mutants	Nakata	2012-02-15 18:30:38	McConn & Nakata (2002)
		CMD5	crystals are small	0	not allelic to other cmd mutants	Nakata	2012-02-15 18:30:40	McConn & Nakata (2002)
		CMD6	crystals appear longer & thinner, kinked	0	not allelic to other cmd mutants	Nakata	2012-02-15 18:30:48	McConn & Nakata (2002)
		CMD7	crystals are mostly normal with a few diamond shaped	0	not allelic to other cmd mutants	Nakata	2012-02-15 18:30:50	McConn & Nakata (2002)
COD	calcium oxalate defective	COD1	crystals are shaped like diamonds	0	not allelic to other cmd mutants	Nakata	2012-02-15 18:30:57	Nakata & McConn (2000)
		COD2	crystals are long and thin	0	not allelic to other cmd mutants	Nakata	2012-02-15 18:31:00	Nakata & McConn (2000)
		COD3	crystals are shaped like diamonds, thinner, and appear in other cells	0	not allelic to other cmd mutants	Nakata	2012-02-15 18:31:06	Nakata & McConn (2000)
		COD4	crystals are normal in the veins but also occur in other cells	0	not allelic to other cmd mutants	Nakata	2012-02-15 18:31:09	Nakata & McConn (2000)
		COD5	there are no obvious crystals in the veins	0	not allelic to other cmd mutants	Nakata	2012-02-15 18:31:24	Nakata & McConn (2000)
		COD6	crystals are small	0	not allelic to other cmd mutants	Nakata	2012-02-15 18:31:26	Nakata & McConn (2000)
		COD7	crystals appear to form multiple times in a cell	0	not allelic to other cmd mutants	Nakata	2012-02-15 18:31:33	Nakata & McConn (2000)
DMI	doesn't make infections	DMI1	non-nodulating and non-mycorrhizal; recessive	5	LG 2; ion channel	Cook	2012-03-29 11:45:21	Catoira et al. 2000 Wais, et. al. 2000 Penmetsa & Cook 1997
		DMI2	non-nodulating and non-mycorrhizal; recessive	4	LG 5; receptor-like kinase	Denarie	2012-03-27 18:25:31	Catoira et al. 2000 Wais, et. al. 2000
		DMI3	non-nodulating and non-mycorrhizal; recessive	2	LG 8; Calcium calmodulin dependent protein kinase	Denarie	2012-03-27 18:25:31	Catoira et al. 2000 Wais, et. al. 2000
DNF	defective innitrogen fixation	DNF1	Nod+ Fix-	0	not allelic to other DNFs	Long	2012-02-15 18:31:52	Starker et al. 2006
		DNF2	Nod+ Fix-	0	not allelic to other DNFs	Long	2012-02-15 18:31:54	Starker et al. 2006
		DNF3	Nod+ Fix-	0	not allelic to other DNFs	Long	2012-02-15 18:32:00	Starker et al. 2006
		DNF4	Nod+ Fix-	0	not allelic to other DNFs	Long	2012-02-15 18:32:10	Starker et al. 2006
		DNF5	Nod+ Fix-	0	not allelic to other DNFs	Long	2012-02-15 18:32:13	Starker et al. 2006
		DNF6	Nod+ Fix-	0	not allelic to other DNFs	Long	2012-02-15 18:32:18	Starker et al. 2006
		DNF7	Nod+ Fix-	0	not allelic to other DNFs	Long	2012-02-15 18:32:20	Starker et al. 2006
ERN	ERF required for nodulation	ERN	rename of bit & pdl mutants	2	ERF transcription factor LG7	Long & Oldroyd	2012-02-15 18:32:28	Middleton et al. 2007
HCL	defective in root haircurling	-	Nod-, Hac-, but deformation & cortical divisions induced by rhizobia	0	not allelic to dmi1, dmi2, dmi3 or nsp	Denarie	2012-04-06 16:44:11	Wais, et. al. 2000 Catoira, et al. 2001
LATD	lateral root organdefective	-	short primary root, stumpy lateral roots, Fix- nodules	0	top of LG1 (tightly linked to R15J11L). May be allelic to NIP	Harris	2012-02-15 18:32:58	Bright et al. 2005
LFM	leaf marks	-	presence of brown marks on cv. Jemalong leaves; in Jemalong x DZA315.16, this trait is monogenic with absence of marks, which is dominant to presence of marks	0	LG7; allelic to absence of marks - see phenotype	Huguet	2012-02-15 18:33:07	-
LIN	lumpyinfections	-	arrested rhizobial infections; non-nodulating; recessive	0	not allelic to dmi1 or pdl	Cook	2012-02-15 18:33:53	Kuppusamy, et al. 2004
LSS	like sunnsupernodulator	-	hypernodulator; shoot control of phenotype, dominant interaction with sunn	0	not allelic to sunn (sunn seq is wt) LG 4	Long & Frugoli	2012-02-15 18:34:02	-
NFP	Nod factor perception	-	Nod-; defective in NF induced nodulin gene expression, root hair deformation, calcium spiking and NF induced rapid calcium flux. Mycorrhizal phenotype is wt	0	top of LG5; not allelic to dmi1, dmi2, dmi3, nsp1, nsp2 or hcl	Denarie	2012-02-15 18:41:58	Ben Amor, et al, 2003
NIP	numerous infections with polyphenolics	-	more infection threads in nodule primordia, rhizobia fail to enter host plant cells and are contained in infection threads; accumulation of polyphenolic compounds in nodule bumps on roots.	0	not allelic to dmi1,2, nsp, lin, rit, bit, sym1, dnf1,3,6,7; preliminary tests also not allelic to dnf2,4,5	Dickstein	2012-02-15 18:35:22	Veereshlingam, et al. 2004
NSP	nodulation signaling pathway	NSP1	Nod-, Hac-	2	not allelic to dmi1, dmi2, dmi3 or hcl	Denarie	2012-03-26 14:28:09	Catoira et al. 2000 Wais, et. al. 2000
NSP	nodulation signaling pathway	NSP2	defective in Nod factor induction of gene expression, root hair deformation, cortical cell division and bacterial infection. Shows NF induced calcium spiking	0	LG3	Long & Oldroyd	2012-02-15 18:36:08	Kalo, et. al. 2005
PDL	poodle-like root hair clusters	-	arrested rhizobial infections; non-nodulating; recessive	0	see ERN	Cook	2012-02-28 18:13:50	-
PLM	palmyra	-	shoot meristem initiation defective; recessive	0	-	Cook	2012-02-15 18:37:05	Penmetsa & Cook 2000
RAE	restores autoregulation. not elongation	-	supresses hypernodulation defect of sunn-1 allele, not root length defect	0	LG4	Frugoli	2012-02-15 18:37:35	-
RAZ	requires additional zinc	-	necrotic lesions on leaves; shoot hyperaccumulation of Zn and Mn; normal leaves with growth on elevated Zn,recessive	0	-	Grusak	2012-02-15 18:37:54	Ellis, et al. 2003-
RDN	root determined nodulation	-	hypernodulator; recessive, root control of phenotype	0	LG 5	Long & Frugoli	2012-02-15 18:38:10	-
RIT	root hairs, infection threads, trichomes	-	defective in root hairs, infection threads and trichomes	0	LG 3	Long & Oldroyd	2012-02-15 18:38:25	-
SKL	sickle	-	hypernodulator; ethylene insensitive; recessive root	0	Not allelic to sunn; linked to molecular marker SLR1 on LG7	Cook	2012-02-15 18:39:08	Penmetsa & Cook 1997
SLI	sluggish infections	-	nodule development defective; mutant nodules have infection threads that reach the primordia	0	Not allelic to sym1	Dickstein	2012-02-15 18:39:19	-
SPC	sense of podcoiling	-	natural variant determines the sense of pod coiling (clockwise/counterclockwise); clockwise is dominant	0	LG 7	Huguet	2012-02-15 18:38:47	Thoquet et al (2002)
SPK	speckle	-	spontaneous necrotic lesions	0	-	Cook	2012-02-15 18:39:43	Penmetsa & Cook 2000
SUNN	supernumerary nodules	-	hypernodulator; semi-dominant, shoot control of phenotype	4	LG4; LRR receptor kinase like CLV1	Cook & Frugoli	2012-02-15 18:39:59	Penmetsa, et al. 2003
SYM	Medicago truncatula symbiotic gene	SYM1 (TE7)	Nod+ Fix-	0	-	Huguet	2012-02-15 18:40:14	Beneben, et al 1995
SYM	Medicago truncatula symbiotic gene	SYM6	deficient for nitrogen fixation after inoculation with S. meliloti A145	0	LG8	Huguet	2012-02-15 18:40:18	Tirichine, et al. 2000
TAP	M. truncatula apetalla	-	Class B floral homeotic; male sterile; recessive	0	-	Cook	2012-02-15 18:40:32	Penmetsa & Cook 2000

Allele Name	Alt Allele Names	Reference Lab	Altered Phenotype
nsp1-1	B85-1		No
nsp1-2	C54-2		No

Allele Name	Alt Allele Names	Reference Lab	Altered Phenotype
bit		Long & Oldroyd	Yes
pdl		Long & Oldroyd	Yes

Allele Name	Alt Allele Names	Reference Lab	Altered Phenotype
dmi2-1	TR25	Gerard Duc	No
dmi2-2	TR26	Gerard Duc	No
dmi2-3	P1	Dénarié	Yes
dmi2-4	R38	VandenBosch	Yes

Allele Name	Alt Allele Names	Reference Lab	Altered Phenotype
dmi3-1		Dénarié	Don't know
dmi3-2		Dénarié	Don't know

Allele Name	Alt Allele Names	Reference Lab	Altered Phenotype
dmi1-1	C71	Cook	No
dmi1-2	B129	Denarie	No
dmi1-3	Y6	Denarie	No
dmi1-4	3F-4	Oldroyd & Long	No
dmi1-5	1B-5	Oldroyd & Long	No

Allele Name	Alt Allele Names	Reference Lab	Altered Phenotype
sunn-1		Frugoli	No
sunn-2	TR122	Gerard Duc	No
sunn-3	T7-7	Journet	No
sunn-4	TRV3,TRV17,TRV38	Gerard Duc	No