Accession | TIGR00009 |
Name | L28 |
Function | ribosomal protein bL28 |
Gene Symbol | rpmB |
Trusted Cutoff | 48.30 |
Domain Trusted Cutoff | 48.30 |
Noise Cutoff | 42.85 |
Domain Noise Cutoff | 42.85 |
Isology Type | equivalog |
HMM Length | 58 |
Mainrole Category | Protein synthesis |
Subrole Category | Ribosomal proteins: synthesis and modification |
Gene Ontology Term | GO:0000311: plastid large ribosomal subunit cellular_component |
| GO:0003735: structural constituent of ribosome molecular_function |
| GO:0006412: translation biological_process |
| GO:0022625: cytosolic large ribosomal subunit cellular_component |
Author | Holt IE, Richardson DL, Haft DH |
Entry Date | Apr 20 1999 2:04PM |
Last Modified | Sep 4 2014 11:07AM |
Comment | This HMM describes bacterial and chloroplast forms of the 50S ribosomal protein L28, a polypeptide about 60 amino acids in length. Mitochondrial homologs differ substantially in architecture (e.g. SP|P36525 from Saccharomyces cerevisiae, which is 258 amino acids long) and are not included. |
References | SE TIGR
DR PFAM; PF00830; Ribosomal_L28
DR INTERPRO; IPR001383; Ribosomal_L28
DR HAMAP; MF_00373; 502 of 509 |
Genome Property | GenProp0174: ribosome, bacterial, large subunit (HMM) |
| GenProp0799: bacterial core gene set, exactly 1 per genome (HMM) |