Accession | TIGR00148 |
Name | TIGR00148 |
Function | decarboxylase, UbiD family |
Trusted Cutoff | 244.85 |
Domain Trusted Cutoff | 244.85 |
Noise Cutoff | 15.90 |
Domain Noise Cutoff | 15.90 |
Isology Type | subfamily |
EC Number | 4.1.1.- |
HMM Length | 438 |
Mainrole Category | Unknown function |
Subrole Category | General |
Gene Ontology Term | GO:0016831: carboxy-lyase activity molecular_function |
Author | Haft DH |
Entry Date | Apr 20 1999 2:05PM |
Last Modified | Feb 21 2012 12:15PM |
Comment | The member of this family in E. coli is UbiD, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase. The family described by this HMM, however, is broad enough that it is likely to contain several different decarboxylases.
Found in bacteria, archaea, and yeast, with two members in A. fulgidus. No homologs were detected besides those classified as orthologs. The member from H. pylori has a C-terminal extension of just over 100 residues that is shared in part by the Aquifex aeolicus homolog. |
References | SE TIGR
RN [1]
RM 11029449
RT Identification of the ubiD gene on the Escherichia coli chromosome.
RA Zhang H, Javor GT.
RL J Bacteriol. 2000 Nov;182(21):6243-6.
RN [2]
RM 12799002
RT Regulation of the isofunctional genes ubiD and ubiX of the ubiquinone biosynthetic pathway of Escherichia coli.
RA Zhang H, Javor GT.
RL FEMS Microbiol Lett. 2003 Jun 6;223(1):67-72.
DR HAMAP; MF_01636; 114 of 117 |