HMM Summary Page: TIGR00196

FunctionYjeF family C-terminal domain
Trusted Cutoff129.85
Domain Trusted Cutoff129.85
Noise Cutoff97.70
Domain Noise Cutoff97.70
Isology Typehypoth_equivalog_domain
HMM Length277
Mainrole CategoryUnknown function
Subrole CategoryGeneral
AuthorHaft DH
Entry DateApr 20 1999 2:10PM
Last ModifiedNov 29 2011 3:21PM
CommentE. coli yjeF has full-length orthologs in a number of species, all of unknown function. However, yeast YNL200C is homologous and corresponds to the N-terminal region while yeast YKL151C and B. subtilis yxkO correspond to this C-terminal region only. With search program hmmsw, the present model hits hydroxyethylthiazole kinase, an enzyme associated with thiamine biosynthesis, with scores between 10 and 30. The noise cutoff for this family is set higher, at 40 bits.
ReferencesDR PROSITE: PDOC00806 PS01049 PS01050