HMM Summary Page: TIGR00197
| Accession | TIGR00197 |
| Name | yjeF_nterm |
| Function | YjeF family N-terminal domain |
| Trusted Cutoff | 88.60 |
| Domain Trusted Cutoff | 88.60 |
| Noise Cutoff | 64.35 |
| Domain Noise Cutoff | 64.35 |
| Isology Type | hypoth_equivalog_domain |
| HMM Length | 206 |
| Mainrole Category | Unknown function |
| Subrole Category | General |
| Author | Haft DH |
| Entry Date | Apr 20 1999 2:10PM |
| Last Modified | Nov 29 2011 3:20PM |
| Comment | The protein region corresponding to this HMM shows no clear homology to any protein of known function. This HMM is built on yeast protein YNL200C and the N-terminal regions of E. coli yjeF and its orthologs in various species. The C-terminal region of yjeF and its orthologs shows similarity to hydroxyethylthiazole kinase (thiM) and other enzymes involved in thiamine biosynthesis. Yeast YKL151C and B. subtilis yxkO match the yjeF C-terminal domain but lack this region. |
| References | SE TIGR AL clustalw_manual A2 hmmalign GA hmmls |