HMM Summary Page: TIGR00227

AccessionTIGR00227
NameribD_Cterm
Functionriboflavin-specific deaminase C-terminal domain
Trusted Cutoff150.15
Domain Trusted Cutoff150.15
Noise Cutoff82.35
Domain Noise Cutoff82.35
Isology Typedomain
EC Number3.5.4.-
HMM Length216
AuthorHaft DH
Entry DateApr 20 1999 2:09PM
Last ModifiedFeb 14 2011 3:27PM
CommentEubacterial riboflavin-specific deaminases have a zinc-binding domain recognized by the dCMP_cyt_deam HMM toward the N-terminus and this domain toward the C-terminus. Yeast HTP reductase, a riboflavin-biosynthetic enzyme, and several archaeal proteins believed related to riboflavin biosynthesis consist only of this domain and lack the dCMP_cyt_deam domain.
ReferencesA2 hmmalign SE TIGR GA hmmls AL clustalw BD 0274
Genome PropertyGenProp0112: riboflavin, FAD and FMN from GTP and ribulose-5-P (HMM)
GenProp0112: riboflavin, FAD and FMN from GTP and ribulose-5-P (HMM)
GenProp0112: riboflavin, FAD and FMN from GTP and ribulose-5-P (HMM)
GenProp0112: riboflavin, FAD and FMN from GTP and ribulose-5-P (HMM)
GenProp0112: riboflavin, FAD and FMN from GTP and ribulose-5-P (HMM)
GenProp0112: riboflavin, FAD and FMN from GTP and ribulose-5-P (HMM)