HMM Summary Page: TIGR00278

Functionputative membrane protein insertion efficiency factor
Gene SymbolyidD
Trusted Cutoff57.25
Domain Trusted Cutoff57.25
Noise Cutoff44.50
Domain Noise Cutoff44.50
Isology Typeequivalog
HMM Length75
Mainrole CategoryHypothetical proteins
Subrole CategoryConserved
AuthorHaft DH
Entry DateApr 20 1999 2:05PM
Last ModifiedAug 13 2012 3:07PM
CommentThis HMM describes a family, YidD, of small, non-essential proteins now suggested to improve YidC-dependent inner membrane protein insertion. A related protein is found in the temperature phage HP1 of Haemophilus influenzae. Annotation of some members of this family as hemolysins appears to represent propagation from an unpublished GenBank submission, L36462, attributed to Aeromonas hydrophila but a close match to E. coli.
ReferencesRN [1] RM PMID:21803992 RT Role for Escherichia coli YidD in membrane protein insertion. RA Yu Z, Laven M, Klepsch M, de Gier JW, Bitter W, van Ulsen P, Luirink J RL J Bacteriol. 2011 Oct;193(19):5242-51. DR HAMAP; MF_00386; 369 of 379