HMM Summary Page: TIGR00611

FunctionDNA replication and repair protein RecF
Gene SymbolrecF
Trusted Cutoff159.45
Domain Trusted Cutoff159.45
Noise Cutoff154.15
Domain Noise Cutoff154.15
Isology Typesubfamily
HMM Length365
Mainrole CategoryDNA metabolism
Subrole CategoryDNA replication, recombination, and repair
Gene Ontology TermGO:0003697: single-stranded DNA binding molecular_function
GO:0005524: ATP binding molecular_function
GO:0006260: DNA replication biological_process
GO:0006281: DNA repair biological_process
GO:0006310: DNA recombination biological_process
GO:0009432: SOS response biological_process
AuthorLoftus BJ, Eisen JA
Entry DateOct 19 1999 6:20PM
Last ModifiedFeb 14 2011 3:27PM
CommentAll proteins in this family for which functions are known are DNA binding proteins that assist the filamentation of RecA onto DNA for the initiation of recombination or recombinational repair. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
ReferencesGA hmmsearch GA hmmsearch GA hmmsearch DR SWISSPROT; P05651; DR HAMAP; MF_00365; 313 of 317
Genome PropertyGenProp0491: recFOR recombination pathway (HMM)