HMM Summary Page: TIGR00644

AccessionTIGR00644
NamerecJ
Functionsingle-stranded-DNA-specific exonuclease RecJ
Gene SymbolrecJ
Trusted Cutoff396.90
Domain Trusted Cutoff396.90
Noise Cutoff230.05
Domain Noise Cutoff230.05
Isology Typeequivalog
EC Number3.1.-.-
HMM Length546
Mainrole CategoryDNA metabolism
Subrole CategoryDNA replication, recombination, and repair
Gene Ontology TermGO:0006310: DNA recombination biological_process
GO:0006310: DNA recombination biological_process
GO:0006310: DNA recombination biological_process
GO:0008297: single-stranded DNA specific exodeoxyribonuclease activity molecular_function
GO:0008297: single-stranded DNA specific exodeoxyribonuclease activity molecular_function
GO:0008297: single-stranded DNA specific exodeoxyribonuclease activity molecular_function
AuthorHaft DH, Loftus BJ, Eisen JA
Entry DateOct 25 1999 11:40AM
Last ModifiedFeb 14 2011 3:27PM
CommentAll proteins in this family are 5'-3' single-strand DNA exonucleases. These proteins are used in some aspects of mismatch repair, recombination, and recombinational repair.
ReferencesA2 hmmalign RM 9110030
Genome PropertyGenProp0491: recFOR recombination pathway (HMM)
GenProp0491: recFOR recombination pathway (HMM)
GenProp0491: recFOR recombination pathway (HMM)
GenProp0491: recFOR recombination pathway (HMM)
GenProp0491: recFOR recombination pathway (HMM)
GenProp0491: recFOR recombination pathway (HMM)
GenProp0491: recFOR recombination pathway (HMM)
GenProp0491: recFOR recombination pathway (HMM)
GenProp0491: recFOR recombination pathway (HMM)