HMM Summary Page: TIGR00964

AccessionTIGR00964
NamesecE_bact
Functionpreprotein translocase, SecE subunit
Gene SymbolsecE
Trusted Cutoff27.55
Domain Trusted Cutoff27.55
Noise Cutoff25.65
Domain Noise Cutoff25.65
Isology Typeequivalog
HMM Length57
Mainrole CategoryProtein fate
Subrole CategoryProtein and peptide secretion and trafficking
Gene Ontology TermGO:0005887: integral to plasma membrane cellular_component
GO:0005887: integral to plasma membrane cellular_component
GO:0005887: integral to plasma membrane cellular_component
GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity molecular_function
GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity molecular_function
GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity molecular_function
GO:0043952: protein transport by the Sec complex biological_process
GO:0043952: protein transport by the Sec complex biological_process
GO:0043952: protein transport by the Sec complex biological_process
AuthorLoftus BJ, Haft DH
Entry DateSep 28 2000 2:50PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM represents exclusively the bacterial (and some organellar) SecE protein. SecE is part of the core heterotrimer, SecYEG, of the Sec preprotein translocase system. Other components are the ATPase SecA, a cytosolic chaperone SecB, and an accessory complex of SecDF and YajC.
ReferencesDR URL; http://tcdb.ucsd.edu/tcdb/tcfamilybrowse.php?tcname=3.A.5
Genome PropertyGenProp0799: bacterial core gene set, exactly 1 per genome (HMM)
GenProp0799: bacterial core gene set, exactly 1 per genome (HMM)
GenProp0209: Sec system preprotein translocase (HMM)
GenProp0209: Sec system preprotein translocase (HMM)
GenProp0799: bacterial core gene set, exactly 1 per genome (HMM)
GenProp0799: bacterial core gene set, exactly 1 per genome (HMM)
GenProp0209: Sec system preprotein translocase (HMM)
GenProp0209: Sec system preprotein translocase (HMM)
GenProp0799: bacterial core gene set, exactly 1 per genome (HMM)
GenProp0799: bacterial core gene set, exactly 1 per genome (HMM)
GenProp0209: Sec system preprotein translocase (HMM)
GenProp0209: Sec system preprotein translocase (HMM)