HMM Summary Page: TIGR00981

AccessionTIGR00981
NamerpsL_bact
Functionribosomal protein S12
Gene SymbolrpsL
Trusted Cutoff112.95
Domain Trusted Cutoff112.95
Noise Cutoff96.10
Domain Noise Cutoff96.10
Isology Typeequivalog
HMM Length124
Mainrole CategoryProtein synthesis
Subrole CategoryRibosomal proteins: synthesis and modification
Gene Ontology TermGO:0000314: organellar small ribosomal subunit cellular_component
GO:0003735: structural constituent of ribosome molecular_function
GO:0006412: translation biological_process
GO:0022627: cytosolic small ribosomal subunit cellular_component
AuthorHaft DH
Entry DateOct 3 2000 10:53AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM recognizes ribosomal protein S12 of Bacteria, mitochondria, and chloroplasts. The homologous ribosomal proteins of Archaea and Eukarya, termed S23 in Eukarya and S12 or S23 in Archaea, score below the trusted cutoff.
References DR HAMAP; MF_00403; 670 of 726
Genome PropertyGenProp0175: ribosome, bacterial, small subunit (HMM)
GenProp0799: bacterial core gene set, exactly 1 per genome (HMM)