HMM Summary Page: TIGR01012

Functionribosomal protein uS2
Gene SymbolrpsB
Trusted Cutoff211.50
Domain Trusted Cutoff211.50
Noise Cutoff92.60
Domain Noise Cutoff92.60
Isology Typeequivalog
HMM Length196
Mainrole CategoryProtein synthesis
Subrole CategoryRibosomal proteins: synthesis and modification
Gene Ontology TermGO:0003735: structural constituent of ribosome molecular_function
GO:0006412: translation biological_process
GO:0022627: cytosolic small ribosomal subunit cellular_component
AuthorHaft DH
Entry DateOct 27 2000 3:53PM
Last ModifiedSep 4 2014 11:52AM
CommentThis HMM describes the ribosomal protein of the cytosol and of Archaea, homologous to S2 of bacteria. It is designated typically as Sa in eukaryotes and Sa or S2 in the archaea. TIGR01011 describes the related protein of organelles and bacteria.
ReferencesDR HAMAP; MF_00291; 50 of 736
Genome PropertyGenProp0831: archaeal core gene set, exactly 1 per genome (HMM)