HMM Summary Page: TIGR01020

AccessionTIGR01020
NameuS5_euk_arch
Functionribosomal protein uS5
Gene SymbolrpsE
Trusted Cutoff181.65
Domain Trusted Cutoff181.65
Noise Cutoff122.55
Domain Noise Cutoff122.55
Isology Typeequivalog
HMM Length212
Mainrole CategoryProtein synthesis
Subrole CategoryRibosomal proteins: synthesis and modification
Gene Ontology TermGO:0003735: structural constituent of ribosome molecular_function
GO:0003735: structural constituent of ribosome molecular_function
GO:0003735: structural constituent of ribosome molecular_function
GO:0006412: translation biological_process
GO:0006412: translation biological_process
GO:0006412: translation biological_process
GO:0022627: cytosolic small ribosomal subunit cellular_component
GO:0022627: cytosolic small ribosomal subunit cellular_component
GO:0022627: cytosolic small ribosomal subunit cellular_component
AuthorDurkin S
Entry DateNov 7 2000 1:39PM
Last ModifiedSep 4 2014 11:57AM
CommentThis model finds eukaryotic ribosomal protein uS5 (previously S2 in yeast and human) as well as archaeal ribosomal protein uS5.
ReferencesDR HAMAP; MF_01307; 47 of 571
Genome PropertyGenProp0831: archaeal core gene set, exactly 1 per genome (HMM)
GenProp0831: archaeal core gene set, exactly 1 per genome (HMM)
GenProp0831: archaeal core gene set, exactly 1 per genome (HMM)
GenProp0815: archaeal-only core gene set (HMM)
GenProp0815: archaeal-only core gene set (HMM)
GenProp0815: archaeal-only core gene set (HMM)
GenProp0815: archaeal-only core gene set (HMM)
GenProp0815: archaeal-only core gene set (HMM)
GenProp0815: archaeal-only core gene set (HMM)
GenProp0831: archaeal core gene set, exactly 1 per genome (HMM)
GenProp0831: archaeal core gene set, exactly 1 per genome (HMM)
GenProp0831: archaeal core gene set, exactly 1 per genome (HMM)
GenProp0831: archaeal core gene set, exactly 1 per genome (HMM)
GenProp0831: archaeal core gene set, exactly 1 per genome (HMM)
GenProp0831: archaeal core gene set, exactly 1 per genome (HMM)
GenProp0815: archaeal-only core gene set (HMM)
GenProp0815: archaeal-only core gene set (HMM)
GenProp0815: archaeal-only core gene set (HMM)