HMM Summary Page: TIGR01021

AccessionTIGR01021
NamerpsE_bact
Functionribosomal protein S5
Gene SymbolrpsE
Trusted Cutoff164.05
Domain Trusted Cutoff164.05
Noise Cutoff119.35
Domain Noise Cutoff119.35
Isology Typeequivalog
HMM Length156
Mainrole CategoryProtein synthesis
Subrole CategoryRibosomal proteins: synthesis and modification
Gene Ontology TermGO:0000312: plastid small ribosomal subunit cellular_component
GO:0003735: structural constituent of ribosome molecular_function
GO:0006412: translation biological_process
GO:0022627: cytosolic small ribosomal subunit cellular_component
AuthorDurkin S, Haft DH
Entry DateNov 7 2000 1:40PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis model finds chloroplast ribosomal protein S5 as well as bacterial ribosomal protein S5. A candidate mitochondrial form (Saccharomyces cerevisiae YBR251W and its homolog) differs substantially and is not included in this model.
ReferencesDR EXPERIMENTAL; EGAD|12973|EC3303; Eschericia coli DR OUTGROUP; EGAD|44645|MJ0475; archaeal DR HAMAP; MF_01307; 519 of 571
Genome PropertyGenProp0175: ribosome, bacterial, small subunit (HMM)
GenProp0799: bacterial core gene set, exactly 1 per genome (HMM)