HMM Summary Page: TIGR01025

AccessionTIGR01025
NamerpsS_arch
Functionribosomal protein S19
Gene SymbolrpsS
Trusted Cutoff139.00
Domain Trusted Cutoff139.00
Noise Cutoff72.65
Domain Noise Cutoff72.65
Isology Typeequivalog
HMM Length135
Mainrole CategoryProtein synthesis
Subrole CategoryRibosomal proteins: synthesis and modification
Gene Ontology TermGO:0003735: structural constituent of ribosome molecular_function
GO:0006412: translation biological_process
GO:0022627: cytosolic small ribosomal subunit cellular_component
AuthorHaft DH
Entry DateNov 8 2000 9:12AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM represents eukaryotic ribosomal protein S15 and its archaeal equivalent. It excludes bacterial and organellar ribosomal protein S19. The nomenclature for the archaeal members is unresolved and given variously as S19 (after the more distant bacterial homologs) or S15.
References DR HAMAP; MF_00531; 52 of 757
Genome PropertyGenProp0815: archaeal-only core gene set (HMM)
GenProp0831: archaeal core gene set, exactly 1 per genome (HMM)