HMM Summary Page: TIGR01031

AccessionTIGR01031
NamerpmF_bact
Functionribosomal protein L32
Gene SymbolrpmF
Trusted Cutoff22.60
Domain Trusted Cutoff22.60
Noise Cutoff22.20
Domain Noise Cutoff22.20
Isology Typeequivalog
HMM Length56
Mainrole CategoryProtein synthesis
Subrole CategoryRibosomal proteins: synthesis and modification
Gene Ontology TermGO:0000315: organellar large ribosomal subunit cellular_component
GO:0003735: structural constituent of ribosome molecular_function
GO:0006412: translation biological_process
GO:0022625: cytosolic large ribosomal subunit cellular_component
AuthorUjwal ML, Haft DH
Entry DateNov 13 2000 2:47PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis protein describes bacterial ribosomal protein L32. The noise cutoff is set low enough to include the equivalent protein from mitochondria and chloroplasts. No related proteins from the Archaea nor from the eukaryotic cytosol are detected by this model. This model is a fragment model; the putative L32 of some species shows similarity only toward the N-terminus.
ReferencesDR COGS; COG0333 DR HAMAP; MF_00340; 572 of 617
Genome PropertyGenProp0174: ribosome, bacterial, large subunit (HMM)
GenProp0799: bacterial core gene set, exactly 1 per genome (HMM)