HMM Summary Page: TIGR01171

AccessionTIGR01171
NamerplB_bact
Functionribosomal protein L2
Gene SymbolrplB
Trusted Cutoff174.50
Domain Trusted Cutoff174.50
Noise Cutoff164.85
Domain Noise Cutoff164.85
Isology Typeequivalog
HMM Length275
Mainrole CategoryProtein synthesis
Subrole CategoryRibosomal proteins: synthesis and modification
Gene Ontology TermGO:0000315: organellar large ribosomal subunit cellular_component
GO:0003735: structural constituent of ribosome molecular_function
GO:0006412: translation biological_process
GO:0022625: cytosolic large ribosomal subunit cellular_component
AuthorHaft DH
Entry DateFeb 12 2001 2:55PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis model distinguishes bacterial and organellar ribosomal protein L2 from its counterparts in the archaea nad in the eukaryotic cytosol. Plant mitochondrial examples tend to have long, variable inserts.
References DR HAMAP; MF_01320; 676 of 742
Genome PropertyGenProp0174: ribosome, bacterial, large subunit (HMM)
GenProp0799: bacterial core gene set, exactly 1 per genome (HMM)