HMM Summary Page: TIGR01216

AccessionTIGR01216
NameATP_synt_epsi
FunctionATP synthase F1, epsilon subunit
Gene SymbolatpC
Trusted Cutoff67.25
Domain Trusted Cutoff67.25
Noise Cutoff62.35
Domain Noise Cutoff62.35
Isology Typeequivalog
EC Number3.6.3.14
HMM Length130
Mainrole CategoryEnergy metabolism
Subrole CategoryATP-proton motive force interconversion
Gene Ontology TermGO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) cellular_component
GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) cellular_component
GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) cellular_component
GO:0015986: ATP synthesis coupled proton transport biological_process
GO:0015986: ATP synthesis coupled proton transport biological_process
GO:0015986: ATP synthesis coupled proton transport biological_process
GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) cellular_component
GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) cellular_component
GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) cellular_component
GO:0045262: plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) cellular_component
GO:0045262: plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) cellular_component
GO:0045262: plasma membrane proton-transporting ATP synthase complex, catalytic core F(1) cellular_component
GO:0046933: hydrogen ion transporting ATP synthase activity, rotational mechanism molecular_function
GO:0046933: hydrogen ion transporting ATP synthase activity, rotational mechanism molecular_function
GO:0046933: hydrogen ion transporting ATP synthase activity, rotational mechanism molecular_function
AuthorHaft DH
Entry DateApr 25 2001 10:57AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM describes one of the five types of subunits in the F1 part of F1/F0 ATP synthases. Members of this family are designated epsilon in bacterial and chloroplast systems but designated delta in mitochondria, where the counterpart of the bacterial delta subunit is designated OSCP. In a few cases (Propionigenium modestum, Acetobacterium woodii) scoring above the trusted cutoff and designated here as exceptions, Na+ replaces H+ for translocation.
ReferencesDR PFAM; PF00401; ATP synthase, Delta/Epsilon chain DR EXCEPTION; SP|P29709; sodium-translocating ATP synthase, F1 epsilon chain; Propionigenium modestum DR EXCEPTION; SP|P50009; sodium-translocating ATP synthase, F1 epsilon chain; Acetobacterium woodii DR HAMAP; MF_00530; 539 of 553
Genome PropertyGenProp0128: F1/F0 ATPase (HMM)
GenProp0128: F1/F0 ATPase (HMM)
GenProp0128: F1/F0 ATPase (HMM)
GenProp0128: F1/F0 ATPase (HMM)
GenProp0128: F1/F0 ATPase (HMM)
GenProp0128: F1/F0 ATPase (HMM)