HMM Summary Page: TIGR01309

AccessionTIGR01309
NameL30P_arch
Functionribosomal protein L30P
Gene SymbolrpmD
Trusted Cutoff150.05
Domain Trusted Cutoff150.05
Noise Cutoff91.65
Domain Noise Cutoff91.65
Isology Typeequivalog
HMM Length151
Mainrole CategoryProtein synthesis
Subrole CategoryRibosomal proteins: synthesis and modification
Gene Ontology TermGO:0003735: structural constituent of ribosome molecular_function
GO:0006412: translation biological_process
GO:0022625: cytosolic large ribosomal subunit cellular_component
AuthorHaft DH
Entry DateJul 17 2001 3:33PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM represents the archaeal ribosomal protein similar to longer (~ 250 residue) eukaryotic 60S ribosomal protein L7 and to the much shorter (~ 60 residue) bacterial 50S ribosomal protein L30. Protein naming follows the SwissProt designation as L30P, while the gene symbol rpmD follows TIGR usage.
References DR HAMAP; MF_01371; 48 of 535
Genome PropertyGenProp0831: archaeal core gene set, exactly 1 per genome (HMM)