HMM Summary Page: TIGR01332

Functioncytochrome b559, alpha subunit
Gene SymbolpsbE
Trusted Cutoff93.95
Domain Trusted Cutoff93.95
Noise Cutoff25.90
Domain Noise Cutoff25.90
Isology Typeequivalog
HMM Length80
Mainrole CategoryEnergy metabolism
Subrole CategoryPhotosynthesis
Gene Ontology TermGO:0009055: electron carrier activity molecular_function
GO:0009538: photosystem I reaction center cellular_component
AuthorHaft DH
Entry DateAug 30 2001 11:52AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM describes the alpha subunit of cytochrome b559, about 83 residues in length. The N-terminal half is homologous to the ~ 40-residue beta subunit. Cytochrome b559 is associated with photosystem II. Sequences scoring between trusted and noise cutoffs are fragments.
ReferencesDR PFAM; PF00284; cytochr_b559a DR PFAM; PF00283; cytochr_b559 DR HAMAP; MF_00642; 117 of 117
Genome PropertyGenProp0661: photosystem II (HMM)