HMM Summary Page: TIGR01403

Functiontype III secretion protein, HrpO family
Trusted Cutoff76.50
Domain Trusted Cutoff76.50
Noise Cutoff73.40
Domain Noise Cutoff73.40
Isology Typesubfamily
HMM Length81
Mainrole CategoryProtein fate
Subrole CategoryProtein and peptide secretion and trafficking
Gene Ontology TermGO:0030254: protein secretion by the type III secretion system biological_process
AuthorHaft DH
Entry DateDec 19 2001 5:42PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM represents one of several families of proteins related to bacterial flagellar biosynthesis proteins and involved in bacterial type III protein secretion systems. This family is homologous to, but distinguished from, flagellar biosynthetic protein FliQ. This model may not identify all type III secretion system FliQ homologs.
ReferencesDR OUTGROUP; SP:P54701; FliQ; Salmonella choleraesuis DR OUTGROUP; SP:P35535; FliQ; Bacillus subtilis
Genome PropertyGenProp0052: type III secretion (HMM)