HMM Summary Page: TIGR01554

Functionphage major capsid protein, HK97 family
Trusted Cutoff23.50
Domain Trusted Cutoff23.50
Noise Cutoff21.00
Domain Noise Cutoff21.00
Isology Typeequivalog
HMM Length385
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryProphage functions
Gene Ontology TermGO:0005198: structural molecule activity molecular_function
GO:0019012: virion cellular_component
GO:0019068: virion assembly biological_process
AuthorFouts DE, Haft DH
Entry DateJun 14 2002 10:25AM
Last ModifiedMay 11 2011 6:30PM
CommentThis HMM family represents the major capsid protein component of the heads (capsids) of bacteriophage HK97, phi-105, P27, and related phage. This model represents one of several analogous families lacking detectable sequence similarity. The gene encoding this component is typically located in an operon encoding the small and large terminase subunits, the portal protein and the prohead or maturation protease.
Genome PropertyGenProp0208: phage: major features (HMM)