HMM Summary Page: TIGR01560

Functionuncharacterized phage protein (possible DNA packaging)
Trusted Cutoff26.35
Domain Trusted Cutoff26.35
Noise Cutoff26.00
Domain Noise Cutoff26.00
Isology Typehypoth_equivalog
HMM Length91
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryProphage functions
Gene Ontology TermGO:0016032: viral reproduction biological_process
GO:0019038: provirus cellular_component
AuthorHaft DH
Entry DateJun 20 2002 3:29PM
Last ModifiedFeb 14 2011 3:27PM
CommentThis HMM describes a small (~ 100 amino acids) protein found in phage and in putative prophage regions of a number of bacterial genomes. Members have been annotated in some cases as a possible DNA packaging protein, but the source of this annotation was not traced during construction of this model.
Genome PropertyGenProp0208: phage: major features (HMM)