HMM Summary Page: TIGR01563

AccessionTIGR01563
Namegp16_SPP1
Functionputative phage head-tail adaptor
Trusted Cutoff20.60
Domain Trusted Cutoff20.60
Noise Cutoff20.00
Domain Noise Cutoff20.00
Isology Typehypoth_equivalog
HMM Length101
Mainrole CategoryMobile and extrachromosomal element functions
Subrole CategoryProphage functions
Gene Ontology TermGO:0005198: structural molecule activity molecular_function
GO:0005198: structural molecule activity molecular_function
GO:0019012: virion cellular_component
GO:0019012: virion cellular_component
GO:0019068: virion assembly biological_process
GO:0019068: virion assembly biological_process
AuthorHaft DH
Entry DateJun 25 2002 10:28AM
Last ModifiedFeb 14 2011 3:27PM
CommentThis family describes a small protein of about 100 amino acids found in bacteriophage and in bacterial prophage regions. Examples include gp9 of phage HK022 and gp16 of phage SPP1. This minor structural protein is suggested to be a head-tail adaptor protein (although the source of this annotation was not traced during construction of this model).
ReferencesRM 10860721 RT Genomic sequences of bacteriophages HK97 and HK022: pervasive genetic mosaicism in the lambdoid bacteriophages. RA Juhala RJ, Ford ME, Duda RL, Youlton A, Hatfull GF, Hendrix RW. RL J Mol Biol 2000 May 26;299(1):27-51
Genome PropertyGenProp0208: phage: major features (HMM)
GenProp0208: phage: major features (HMM)