HMM Summary Page: TIGR01564
Accession | TIGR01564 |
Name | S_layer_MJ |
Function | S-layer protein |
Trusted Cutoff | 25.00 |
Domain Trusted Cutoff | 25.00 |
Noise Cutoff | 20.00 |
Domain Noise Cutoff | 20.00 |
Isology Type | subfamily |
HMM Length | 571 |
Mainrole Category | Cell envelope |
Subrole Category | Surface structures |
Author | Haft DH |
Entry Date | Jun 26 2002 1:08PM |
Last Modified | Feb 14 2011 3:27PM |
Comment | This HMM represents one of several families of proteins associated with the formation of prokaryotic S-layers. Members of this family are found in archaeal species, including Pyrococcus horikoshii (split into two tandem reading frames), Methanococcus jannaschii, and related species. Some local similarity can be found to other S-layer protein families. |
References | DR SWISSPROT; Q58232; annotated entry from Methanococcus jannaschii. |